Atomistry » Iodine » PDB 1gjd-1lij » 1igb
Atomistry »
  Iodine »
    PDB 1gjd-1lij »
      1igb »

Iodine in PDB 1igb: Aeromonas Proteolytica Aminopeptidase Complexed with the Inhibitor Para-Iodo-D-Phenylalanine Hydroxamate

Enzymatic activity of Aeromonas Proteolytica Aminopeptidase Complexed with the Inhibitor Para-Iodo-D-Phenylalanine Hydroxamate

All present enzymatic activity of Aeromonas Proteolytica Aminopeptidase Complexed with the Inhibitor Para-Iodo-D-Phenylalanine Hydroxamate:
3.4.11.10;

Protein crystallography data

The structure of Aeromonas Proteolytica Aminopeptidase Complexed with the Inhibitor Para-Iodo-D-Phenylalanine Hydroxamate, PDB code: 1igb was solved by B.Chevrier, H.D'orchymont, C.Schalk, C.Tarnus, D.Moras, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 2.30
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 109.150, 109.150, 98.350, 90.00, 90.00, 120.00
R / Rfree (%) 16 / 24.1

Other elements in 1igb:

The structure of Aeromonas Proteolytica Aminopeptidase Complexed with the Inhibitor Para-Iodo-D-Phenylalanine Hydroxamate also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Iodine Binding Sites:

The binding sites of Iodine atom in the Aeromonas Proteolytica Aminopeptidase Complexed with the Inhibitor Para-Iodo-D-Phenylalanine Hydroxamate (pdb code 1igb). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the Aeromonas Proteolytica Aminopeptidase Complexed with the Inhibitor Para-Iodo-D-Phenylalanine Hydroxamate, PDB code: 1igb:

Iodine binding site 1 out of 1 in 1igb

Go back to Iodine Binding Sites List in 1igb
Iodine binding site 1 out of 1 in the Aeromonas Proteolytica Aminopeptidase Complexed with the Inhibitor Para-Iodo-D-Phenylalanine Hydroxamate


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Aeromonas Proteolytica Aminopeptidase Complexed with the Inhibitor Para-Iodo-D-Phenylalanine Hydroxamate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:I520

b:49.7
occ:1.00
 I4 A:IPO520 0.0 49.7 1.0
C4 A:IPO520 2.1 44.3 1.0
C5 A:IPO520 3.0 37.9 1.0
C3 A:IPO520 3.0 43.5 1.0
CD2 A:PHE248 3.1 36.9 1.0
CA A:PHE248 3.6 18.6 1.0
CB A:PHE248 3.6 25.1 1.0
SG A:CYS223 3.6 3.2 1.0
CD1 A:ILE193 3.7 5.0 1.0
CG A:PHE248 3.8 36.4 1.0
CE2 A:PHE244 4.0 2.1 1.0
CE2 A:PHE248 4.1 46.3 1.0
N A:PHE248 4.1 15.1 1.0
O A:THR222 4.2 10.3 1.0
CA A:CYS223 4.3 12.0 1.0
H A:PHE248 4.3 0.0 1.0
C6 A:IPO520 4.3 39.8 1.0
CD2 A:PHE244 4.3 4.9 1.0
C2 A:IPO520 4.4 37.8 1.0
N A:CYS223 4.4 5.8 1.0
C A:THR222 4.5 9.5 1.0
CZ A:PHE244 4.5 2.1 1.0
CB A:CYS223 4.6 9.0 1.0
CD2 A:TYR251 4.8 14.7 1.0
CG1 A:ILE193 4.8 2.5 1.0
C A:PHE248 4.9 23.1 1.0
C1 A:IPO520 4.9 39.1 1.0
H A:CYS223 4.9 0.0 1.0
C A:LYS247 4.9 14.6 1.0

Reference:

B.Chevrier, H.D'orchymont, C.Schalk, C.Tarnus, D.Moras. The Structure of the Aeromonas Proteolytica Aminopeptidase Complexed with A Hydroxamate Inhibitor. Involvement in Catalysis of GLU151 and Two Zinc Ions of the Co-Catalytic Unit. Eur.J.Biochem. V. 237 393 1996.
ISSN: ISSN 0014-2956
PubMed: 8647077
DOI: 10.1111/J.1432-1033.1996.0393K.X
Page generated: Sun Dec 13 19:20:00 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy