Iodine in PDB 1mxi: Structure of Yibk From Haemophilus Influenzae (HI0766): A Methyltransferase with A Cofactor Bound at A Site Formed By A Knot

The structure of Structure of Yibk From Haemophilus Influenzae (HI0766): A Methyltransferase with A Cofactor Bound at A Site Formed By A Knot, PDB code: 1mxi was solved by K.Lim, H.Zhang, A.Tempczyk, N.Bonander, J.Toedt, A.Howard, E.Eisenstein, O.Herzberg, Structure 2 Function Project (S2F), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.70
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	40.800, 40.800, 165.800, 90.00, 90.00, 90.00
R / Rfree (%)	19.6 / 25.4

The binding sites of Iodine atom in the Structure of Yibk From Haemophilus Influenzae (HI0766): A Methyltransferase with A Cofactor Bound at A Site Formed By A Knot (pdb code 1mxi). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the Structure of Yibk From Haemophilus Influenzae (HI0766): A Methyltransferase with A Cofactor Bound at A Site Formed By A Knot, PDB code: 1mxi:

Iodine binding site 1 out of 1 in the Structure of Yibk From Haemophilus Influenzae (HI0766): A Methyltransferase with A Cofactor Bound at A Site Formed By A Knot


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Structure of Yibk From Haemophilus Influenzae (HI0766): A Methyltransferase with A Cofactor Bound at A Site Formed By A Knot within 5.0Å range: probe atom residue distance (Å) B Occ A:I2001 b:30.3 occ:1.00 CB A:MET131 3.1 20.1 0.5 CE A:MET131 3.3 17.8 0.2 CG A:MET131 3.4 28.8 0.2 CA A:MET131 3.6 16.7 0.5 CB A:MET131 3.7 23.3 0.2 CA A:MET131 3.8 29.4 0.2 N A:ASN132 3.8 17.7 1.0 ND2 A:ASN135 3.9 17.5 1.0 SD A:MET131 4.1 38.1 0.2 CE A:MET131 4.2 18.3 0.5 C A:MET131 4.2 15.5 0.5 C A:MET131 4.3 20.8 0.2 CG A:MET131 4.4 13.7 0.5 CB A:ASN135 4.5 15.3 1.0 CG A:ASN135 4.7 19.2 1.0 CB A:ASN132 4.9 27.0 1.0 N A:MET131 4.9 13.4 0.5 CA A:ASN132 4.9 14.2 1.0 SD A:MET131 5.0 27.3 0.5

K.Lim, H.Zhang, A.Tempczyk, W.Krajewski, N.Bonander, J.Toedt, A.Howard, E.Eisenstein, O.Herzberg. Structure of the Yibk Methyltransferase From Haemophilus Influenzae (HI0766): A Cofactor Bound at A Site Formed By A Knot Proteins V. 51 56 2003.
ISSN: ISSN 0887-3585
PubMed: 12596263
DOI: 10.1002/PROT.10323