Atomistry » Iodine » PDB 1q0t-1v1f » 1s6v
Atomistry »
  Iodine »
    PDB 1q0t-1v1f »
      1s6v »

Iodine in PDB 1s6v: Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link

Enzymatic activity of Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link

All present enzymatic activity of Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link:
1.11.1.5;

Protein crystallography data

The structure of Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link, PDB code: 1s6v was solved by M.Guo, B.Bhaskar, H.Li, T.P.Barrows, T.L.Poulos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.65 / 1.88
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 45.240, 107.920, 88.380, 90.00, 104.42, 90.00
R / Rfree (%) 19 / 24.3

Other elements in 1s6v:

The structure of Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link also contains other interesting chemical elements:

Iron (Fe) 4 atoms

Iodine Binding Sites:

The binding sites of Iodine atom in the Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link (pdb code 1s6v). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link, PDB code: 1s6v:

Iodine binding site 1 out of 1 in 1s6v

Go back to Iodine Binding Sites List in 1s6v
Iodine binding site 1 out of 1 in the Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link within 5.0Å range:
probe atom residue distance (Å) B Occ
A:I800

b:43.6
occ:0.50
O A:ALA8 3.5 38.7 1.0
CG1 A:VAL10 3.7 49.6 1.0
CB A:ALA280 4.0 49.9 1.0
N A:VAL10 4.1 44.5 1.0
C A:ALA8 4.1 38.5 1.0
CD A:PRO281 4.2 44.9 1.0
CD A:PRO277 4.3 42.7 1.0
CA A:ALA280 4.4 49.6 1.0
CA A:SER9 4.5 42.0 1.0
CG A:PRO277 4.5 45.2 1.0
N A:SER9 4.6 39.8 1.0
CB A:ALA8 4.6 33.3 1.0
CB A:VAL10 4.6 49.3 1.0
C A:SER9 4.7 43.0 1.0
CA A:VAL10 5.0 48.3 1.0

Reference:

M.Guo, B.Bhaskar, H.Li, T.P.Barrows, T.L.Poulos. Crystal Structure and Characterization of A Cytochrome C Peroxidase-Cytochrome C Site-Specific Cross-Link Proc.Natl.Acad.Sci.Usa V. 101 5940 2004.
ISSN: ISSN 0027-8424
PubMed: 15071191
DOI: 10.1073/PNAS.0306708101
Page generated: Sun Aug 11 12:47:15 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy