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Iodine in PDB 2izd: Apostreptavidin pH 3.0 I222 Complex

Protein crystallography data

The structure of Apostreptavidin pH 3.0 I222 Complex, PDB code: 2izd was solved by B.A.Katz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 7.50 / 1.60
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 94.880, 105.340, 47.400, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 25.2

Other elements in 2izd:

The structure of Apostreptavidin pH 3.0 I222 Complex also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Iodine Binding Sites:

The binding sites of Iodine atom in the Apostreptavidin pH 3.0 I222 Complex (pdb code 2izd). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the Apostreptavidin pH 3.0 I222 Complex, PDB code: 2izd:

Iodine binding site 1 out of 1 in 2izd

Go back to Iodine Binding Sites List in 2izd
Iodine binding site 1 out of 1 in the Apostreptavidin pH 3.0 I222 Complex


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Apostreptavidin pH 3.0 I222 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:I463

b:53.3
occ:0.50
HG1 D:THR115 2.1 34.3 1.0
H D:THR115 2.3 28.6 1.0
HG21 D:THR115 2.4 32.5 1.0
HD22 D:ASN118 2.5 46.6 1.0
HA D:THR114 2.8 23.9 1.0
HB D:THR114 3.0 19.1 1.0
OG1 D:THR115 3.1 33.7 1.0
HB2 D:ASN118 3.1 35.9 1.0
N D:THR115 3.2 27.7 1.0
CG2 D:THR115 3.3 31.2 1.0
ND2 D:ASN118 3.4 48.3 1.0
CA D:THR114 3.5 23.3 1.0
HG22 D:THR115 3.6 31.1 1.0
CB D:THR114 3.6 20.8 1.0
CB D:THR115 3.8 32.5 1.0
C D:THR114 3.9 26.3 1.0
HD21 D:ASN118 3.9 48.0 1.0
CB D:ASN118 4.0 35.0 1.0
HG B:SER69 4.0 34.3 0.7
HG21 D:THR114 4.1 21.9 1.0
CG D:ASN118 4.1 43.9 1.0
CA D:THR115 4.2 29.7 1.0
HG23 D:THR115 4.2 31.3 1.0
HG B:SER69 4.3 30.4 0.2
HB3 D:ASN118 4.3 35.9 1.0
CG2 D:THR114 4.5 22.1 1.0
OG B:SER69 4.7 36.4 0.7
O D:GLY113 4.7 31.3 1.0
HB D:THR115 4.8 31.2 1.0
H D:ASN118 4.8 36.3 1.0
O D:THR115 4.8 25.9 1.0
HG1 D:THR114 4.9 17.6 1.0
N D:THR114 4.9 26.0 1.0
OG1 D:THR114 4.9 16.4 1.0
HA D:THR115 4.9 30.6 1.0
HG23 D:THR114 4.9 22.2 1.0

Reference:

B.A.Katz, B.A.Katz. N/A N/A.
ISSN: ISSN 0022-2836
PubMed: 9405158
DOI: 10.1006/JMBI.1997.1444
Page generated: Sun Jan 24 17:23:55 2021

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