Iodine in PDB 2j08: Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore

All present enzymatic activity of Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore:
4.1.99.3;

The structure of Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore, PDB code: 2j08 was solved by T.Klar, G.Kaiser, U.Hennecke, T.Carell, A.Batschauer, L.-O.Essen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.32 / 2.61
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	112.620, 112.620, 140.262, 90.00, 90.00, 120.00
R / Rfree (%)	16.3 / 25.6

The structure of Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Iodine atom in the Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore (pdb code 2j08). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore, PDB code: 2j08:

Iodine binding site 1 out of 1 in the Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore within 5.0Å range: probe atom residue distance (Å) B Occ A:I1422 b:31.8 occ:1.00 I8 A:IRF1422 0.0 31.8 1.0 C8 A:IRF1422 2.1 23.3 1.0 C9 A:IRF1422 3.1 13.8 1.0 C7 A:IRF1422 3.1 23.3 1.0 O A:GLY342 3.4 30.1 1.0 C7M A:IRF1422 3.4 17.6 1.0 NH2 A:ARG46 3.8 12.1 1.0 CD2 A:LEU218 4.1 12.0 1.0 O A:ALA217 4.3 15.4 1.0 C9A A:IRF1422 4.3 22.1 1.0 C6 A:IRF1422 4.4 21.1 1.0 O A:HOH2094 4.5 23.0 1.0 C A:GLY342 4.6 34.1 1.0 CB A:ALA217 4.7 14.5 1.0 O A:HOH2077 4.8 19.6 1.0 CZ A:ARG46 4.8 27.5 1.0 C A:ALA217 4.8 17.8 1.0 C5A A:IRF1422 4.9 20.5 1.0

T.Klar, G.Kaiser, U.Hennecke, T.Carell, A.Batschauer, L.-O.Essen. Natural and Non-Natural Antenna Chromophores in the Dna Photolyase From Thermus Thermophilus Chembiochem V. 7 1798 2006.
ISSN: ISSN 1439-4227
PubMed: 17051659
DOI: 10.1002/CBIC.200600206