Iodine in PDB 2w86: Crystal Structure of Fibrillin-1 Domains CBEGF9HYB2CBEGF10, Calcium Saturated Form

The structure of Crystal Structure of Fibrillin-1 Domains CBEGF9HYB2CBEGF10, Calcium Saturated Form, PDB code: 2w86 was solved by S.A.Jensen, S.Iqbal, E.D.Lowe, C.Redfield, P.A.Handford, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.750 / 1.80
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	31.232, 47.258, 89.105, 90.00, 90.00, 90.00
R / Rfree (%)	18.51 / 22.12

The structure of Crystal Structure of Fibrillin-1 Domains CBEGF9HYB2CBEGF10, Calcium Saturated Form also contains other interesting chemical elements:

Calcium

(Ca)

2 atoms

The binding sites of Iodine atom in the Crystal Structure of Fibrillin-1 Domains CBEGF9HYB2CBEGF10, Calcium Saturated Form (pdb code 2w86). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 3 binding sites of Iodine where determined in the Crystal Structure of Fibrillin-1 Domains CBEGF9HYB2CBEGF10, Calcium Saturated Form, PDB code: 2w86:
Jump to Iodine binding site number: 1; 2; 3;

Iodine binding site 1 out of 3 in the Crystal Structure of Fibrillin-1 Domains CBEGF9HYB2CBEGF10, Calcium Saturated Form


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Crystal Structure of Fibrillin-1 Domains CBEGF9HYB2CBEGF10, Calcium Saturated Form within 5.0Å range: probe atom residue distance (Å) B Occ A:I1150 b:54.6 occ:0.50 N A:SER135 3.6 18.0 1.0 OG A:SER135 3.8 22.6 1.0 CA A:PRO134 4.0 18.6 1.0 CB A:SER135 4.2 19.0 1.0 CB A:PRO134 4.3 19.7 1.0 C A:PRO134 4.4 16.6 1.0 CA A:SER135 4.6 19.2 1.0 O A:HOH2137 4.8 28.8 1.0

Iodine binding site 2 out of 3 in the Crystal Structure of Fibrillin-1 Domains CBEGF9HYB2CBEGF10, Calcium Saturated Form


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Crystal Structure of Fibrillin-1 Domains CBEGF9HYB2CBEGF10, Calcium Saturated Form within 5.0Å range: probe atom residue distance (Å) B Occ A:I1151 b:30.0 occ:0.60 O A:HOH2074 3.3 37.9 1.0 N A:LEU67 3.7 16.0 0.5 N A:LEU67 3.7 16.0 0.5 CA A:THR66 3.8 12.8 0.5 CA A:THR66 3.8 12.8 0.5 CB A:GLN70 3.8 17.4 1.0 CB A:THR66 3.9 13.6 0.5 CB A:THR66 3.9 13.6 0.5 CG A:GLN70 4.0 20.0 1.0 C A:THR66 4.3 11.4 0.5 CG2 A:THR66 4.3 14.6 0.5 C A:THR66 4.3 11.4 0.5 CG2 A:THR66 4.4 14.6 0.5 CD1 A:LEU67 4.4 24.7 0.5 CB A:LEU67 4.4 21.4 0.5 CG2 A:VAL112 4.5 28.5 1.0 CG A:LEU67 4.5 26.5 0.5 CB A:LEU67 4.5 21.4 0.5 O A:ALA65 4.6 19.0 1.0 CA A:LEU67 4.6 18.4 0.5 CA A:VAL112 4.7 26.6 1.0 CA A:LEU67 4.7 18.4 0.5 OE1 A:GLN70 4.8 34.0 1.0 O A:LEU67 4.9 16.1 0.5 CD A:GLN70 4.9 27.6 1.0 O A:LEU67 4.9 16.1 0.5 CG A:LEU67 5.0 26.5 0.5 N A:VAL112 5.0 23.3 1.0

Iodine binding site 3 out of 3 in the Crystal Structure of Fibrillin-1 Domains CBEGF9HYB2CBEGF10, Calcium Saturated Form


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 3 of Crystal Structure of Fibrillin-1 Domains CBEGF9HYB2CBEGF10, Calcium Saturated Form within 5.0Å range: probe atom residue distance (Å) B Occ A:I1152 b:30.0 occ:0.50 NH1 A:ARG57 3.4 46.4 1.0 N A:GLY56 3.6 24.8 1.0 CD A:ARG57 3.8 41.7 1.0 CG A:ARG57 4.0 33.0 1.0 CA A:GLY56 4.0 21.7 1.0 CB A:ASP55 4.0 38.4 1.0 C A:GLY56 4.1 20.9 1.0 CB A:ARG57 4.2 26.6 1.0 N A:ARG57 4.2 18.4 1.0 CZ A:ARG57 4.5 47.6 1.0 O A:GLY56 4.5 20.9 1.0 NE A:ARG57 4.6 47.6 1.0 C A:ASP55 4.8 29.3 1.0 CA A:ARG57 4.8 16.8 1.0 O A:ILE54 4.8 19.6 1.0 OD2 A:ASP55 4.9 54.2 1.0 CG A:ASP55 5.0 47.5 1.0

S.A.Jensen, S.Iqbal, E.D.Lowe, C.Redfield, P.A.Handford. Structure and Interdomain Interactions of A Hybrid Domain: A Disulphide-Rich Module of the Fibrillin/Ltbp Superfamily of Matrix Proteins. Structure V. 17 759 2009.
ISSN: ISSN 0969-2126
PubMed: 19446531
DOI: 10.1016/J.STR.2009.03.014