Iodine in PDB 2y44: Crystal Structure of Garp From Trypanosoma Congolense

The structure of Crystal Structure of Garp From Trypanosoma Congolense, PDB code: 2y44 was solved by B.C.Loveless, J.W.Mason, T.Sakurai, N.Inoue, M.Razavi, T.W.Pearson, M.J.Boulanger, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.62 / 1.65
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	36.184, 37.795, 40.680, 106.17, 111.75, 99.50
R / Rfree (%)	19.923 / 25.085

The binding sites of Iodine atom in the Crystal Structure of Garp From Trypanosoma Congolense (pdb code 2y44). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 4 binding sites of Iodine where determined in the Crystal Structure of Garp From Trypanosoma Congolense, PDB code: 2y44:
Jump to Iodine binding site number: 1; 2; 3; 4;

Iodine binding site 1 out of 4 in the Crystal Structure of Garp From Trypanosoma Congolense


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Crystal Structure of Garp From Trypanosoma Congolense within 5.0Å range: probe atom residue distance (Å) B Occ A:I1225 b:25.5 occ:0.50 O A:HOH2225 3.2 39.1 1.0 CE1 A:PHE178 3.8 12.3 1.0 CB A:ALA134 3.8 20.0 1.0 ND1 A:HIS195 3.9 41.1 1.0 CZ A:PHE178 4.0 15.0 1.0 CB A:HIS195 4.1 24.4 1.0 CE2 A:PHE199 4.4 20.2 1.0 OG1 A:THR138 4.4 20.3 1.0 CG A:HIS195 4.4 34.6 1.0 CD1 A:LEU54 4.5 15.4 1.0 CA A:ALA134 4.6 21.0 1.0 CE1 A:HIS195 5.0 43.1 1.0

Iodine binding site 2 out of 4 in the Crystal Structure of Garp From Trypanosoma Congolense


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Crystal Structure of Garp From Trypanosoma Congolense within 5.0Å range: probe atom residue distance (Å) B Occ A:I1226 b:22.9 occ:1.00 CG A:GLU83 3.9 12.3 1.0 CA A:GLU80 4.0 14.4 1.0 CB A:GLU83 4.1 15.8 1.0 CB A:GLU80 4.3 14.0 1.0 CG A:GLU80 4.4 22.4 1.0 CE A:LYS79 4.5 23.9 1.0 N A:GLU80 4.7 15.2 1.0 CG A:LYS79 4.8 13.6 1.0 CD A:LYS79 4.9 17.9 1.0 O A:LYS79 4.9 15.3 1.0 CD A:GLU80 4.9 35.5 1.0

Iodine binding site 3 out of 4 in the Crystal Structure of Garp From Trypanosoma Congolense


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 3 of Crystal Structure of Garp From Trypanosoma Congolense within 5.0Å range: probe atom residue distance (Å) B Occ A:I1227 b:21.4 occ:0.80 O A:HOH2047 3.2 23.1 1.0 CD A:ARG81 4.3 16.9 1.0

Iodine binding site 4 out of 4 in the Crystal Structure of Garp From Trypanosoma Congolense


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 4 of Crystal Structure of Garp From Trypanosoma Congolense within 5.0Å range: probe atom residue distance (Å) B Occ A:I1228 b:33.4 occ:0.80 N A:ASP191 4.0 17.9 1.0 CA A:ASP191 4.0 19.3 1.0 CB A:ASP190 4.1 20.1 1.0 CB A:ASP191 4.1 20.0 1.0 O A:HOH2219 4.1 26.0 1.0 C A:ASP190 4.3 17.5 1.0 OD1 A:ASP191 4.5 26.4 1.0 O A:ASP190 4.7 19.6 1.0 CG A:ASP191 4.8 25.6 1.0 O A:HOH2123 4.8 37.6 1.0 CA A:ASP190 4.9 18.9 1.0

B.C.Loveless, J.W.Mason, T.Sakurai, N.Inoue, M.Razavi, T.W.Pearson, M.J.Boulanger. Structural Characterization and Epitope Mapping of the Glutamic Acid/Alanine-Rich Protein From Trypanosoma Congolense: Defining Assembly on the Parasite Cell Surface. J.Biol.Chem. V. 286 20658 2011.
ISSN: ISSN 0021-9258
PubMed: 21471223
DOI: 10.1074/JBC.M111.218941