Iodine in PDB 3dy6: Ppardelta Complexed with An Anthranilic Acid Partial Agonist

The structure of Ppardelta Complexed with An Anthranilic Acid Partial Agonist, PDB code: 3dy6 was solved by M.L.Lambert, R.Xu, B.G.Shearer, T.M.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.01 / 2.90
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	39.886, 94.324, 97.066, 90.00, 98.30, 90.00
R / Rfree (%)	21.7 / 24.4

The binding sites of Iodine atom in the Ppardelta Complexed with An Anthranilic Acid Partial Agonist (pdb code 3dy6). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the Ppardelta Complexed with An Anthranilic Acid Partial Agonist, PDB code: 3dy6:

Iodine binding site 1 out of 1 in the Ppardelta Complexed with An Anthranilic Acid Partial Agonist


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Ppardelta Complexed with An Anthranilic Acid Partial Agonist within 5.0Å range: probe atom residue distance (Å) B Occ A:I1 b:0.9 occ:1.00 ND2 A:ASN375 3.7 66.4 1.0 CA A:ASN335 3.9 67.1 1.0 CB A:ASN375 4.1 65.3 1.0 N A:LYS336 4.1 67.1 1.0 O A:VAL334 4.2 67.1 1.0 C A:ASN335 4.3 67.1 1.0 CB A:ASN335 4.3 67.0 1.0 CG A:ASN375 4.5 66.0 1.0 CA A:VAL372 4.6 66.1 1.0 CG1 A:VAL372 4.7 66.1 1.0 CG2 A:VAL372 4.8 66.2 1.0 C A:VAL334 4.9 66.8 1.0 N A:ASN335 4.9 66.9 1.0 CB A:VAL372 5.0 66.1 1.0 O A:VAL372 5.0 66.7 1.0

B.G.Shearer, H.S.Patel, A.N.Billin, J.M.Way, D.A.Winegar, M.H.Lambert, R.X.Xu, L.M.Leesnitzer, R.V.Merrihew, S.Huet, T.M.Willson. Discovery of A Novel Class of Ppardelta Partial Agonists Bioorg.Med.Chem.Lett. V. 18 5018 2008.
ISSN: ISSN 0960-894X
PubMed: 18722772
DOI: 10.1016/J.BMCL.2008.08.011