Iodine in PDB 3egv: Ribosomal Protein L11 Methyltransferase (Prma) in Complex with Trimethylated Ribosomal Protein L11

The structure of Ribosomal Protein L11 Methyltransferase (Prma) in Complex with Trimethylated Ribosomal Protein L11, PDB code: 3egv was solved by H.Demirci, S.T.Gregory, A.E.Dahlberg, G.Jogl, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.75
Space group	P 62
Cell size a, b, c (Å), α, β, γ (°)	134.547, 134.547, 48.944, 90.00, 90.00, 120.00
R / Rfree (%)	18.3 / 21.3

The structure of Ribosomal Protein L11 Methyltransferase (Prma) in Complex with Trimethylated Ribosomal Protein L11 also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Iodine atom in the Ribosomal Protein L11 Methyltransferase (Prma) in Complex with Trimethylated Ribosomal Protein L11 (pdb code 3egv). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the Ribosomal Protein L11 Methyltransferase (Prma) in Complex with Trimethylated Ribosomal Protein L11, PDB code: 3egv:

Iodine binding site 1 out of 1 in the Ribosomal Protein L11 Methyltransferase (Prma) in Complex with Trimethylated Ribosomal Protein L11


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Ribosomal Protein L11 Methyltransferase (Prma) in Complex with Trimethylated Ribosomal Protein L11 within 5.0Å range: probe atom residue distance (Å) B Occ B:I201 b:29.4 occ:0.50 N B:LYS2 3.8 30.7 1.0 C5' A:SAH301 4.1 22.1 1.0 CD2 A:TYR193 4.1 32.8 1.0 CAK B:4MM1 4.2 31.6 1.0 CAC B:4MM1 4.3 31.7 1.0 C8 A:SAH301 4.4 25.3 1.0 CE2 A:TYR193 4.4 34.3 1.0 CD B:LYS2 4.4 34.8 1.0 CG B:LYS2 4.5 31.6 1.0 CAD B:4MM1 4.6 31.0 1.0 NAL B:4MM1 4.6 31.4 1.0 C2' A:SAH301 4.7 23.8 1.0 CAJ B:4MM1 4.7 31.8 1.0 O4' A:SAH301 4.7 23.5 1.0 CB B:LYS2 4.7 31.6 1.0 C3' A:SAH301 4.8 23.0 1.0 C4' A:SAH301 4.8 21.9 1.0 CA B:LYS2 4.9 32.1 1.0 SD A:SAH301 4.9 21.6 1.0

H.Demirci, S.T.Gregory, A.E.Dahlberg, G.Jogl. Multiple-Site Trimethylation of Ribosomal Protein L11 By the Prma Methyltransferase. Structure V. 16 1059 2008.
ISSN: ISSN 0969-2126
PubMed: 18611379
DOI: 10.1016/J.STR.2008.03.016