Iodine in PDB 4bva: Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
Enzymatic activity of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
All present enzymatic activity of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.:
1.5.1.25;
Protein crystallography data
The structure of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin., PDB code: 4bva
was solved by
F.Borel,
I.Hachi,
A.Palencia,
M.C.Gaillard,
J.L.Ferrer,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
42.68 /
1.75
|
|
Space group
|
P 1 21 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
45.240,
97.140,
75.670,
90.00,
104.90,
90.00
|
|
R / Rfree (%)
|
14.624 /
19.224
|
Other elements in 4bva:
The structure of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin. also contains other interesting chemical elements:
Iodine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Iodine atom in the Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
(pdb code 4bva). This binding sites where shown within
5.0 Angstroms radius around Iodine atom.
In total 12 binding sites of Iodine where determined in the
Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin., PDB code: 4bva:
Jump to Iodine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iodine binding site 1 out
of 12 in 4bva
Go back to
Iodine Binding Sites List in 4bva
Iodine binding site 1 out
of 12 in the Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
 Mono view
 Stereo pair view
|
|
A full contact list of Iodine with other atoms in the I binding
site number 1 of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:I1314
b:26.5
occ:0.55
|
I1
|
A:T31314
|
0.0
|
26.5
|
0.6
|
|
I1
|
A:T31314
|
0.2
|
26.9
|
0.1
|
|
C5
|
A:T31314
|
2.1
|
23.7
|
0.6
|
|
C5
|
A:T31314
|
2.2
|
24.7
|
0.1
|
|
C3
|
A:T31314
|
3.0
|
25.7
|
0.6
|
|
C7
|
A:T31314
|
3.1
|
21.4
|
0.6
|
|
C3
|
A:T31314
|
3.1
|
24.9
|
0.1
|
|
C7
|
A:T31314
|
3.2
|
22.4
|
0.1
|
|
O2
|
A:T31314
|
3.2
|
18.7
|
0.6
|
|
O2
|
A:T31314
|
3.4
|
21.0
|
0.1
|
|
CD2
|
A:PHE79
|
3.7
|
24.4
|
1.0
|
|
CZ3
|
A:TRP232
|
3.7
|
28.3
|
1.0
|
|
C2
|
A:T31314
|
3.7
|
17.8
|
0.6
|
|
CE2
|
A:PHE79
|
3.8
|
28.1
|
1.0
|
|
CD
|
A:ARG229
|
3.9
|
31.9
|
1.0
|
|
C2
|
A:T31314
|
3.9
|
20.3
|
0.1
|
|
CH2
|
A:TRP232
|
4.0
|
27.9
|
1.0
|
|
CG
|
A:PHE79
|
4.0
|
21.8
|
1.0
|
|
O
|
A:HOH2201
|
4.1
|
34.3
|
1.0
|
|
C4
|
A:T31314
|
4.1
|
18.0
|
0.6
|
|
O
|
A:SER228
|
4.2
|
32.1
|
1.0
|
|
OG
|
A:SER228
|
4.2
|
33.1
|
1.0
|
|
CZ
|
A:PHE79
|
4.2
|
30.3
|
1.0
|
|
C1
|
A:T31314
|
4.3
|
24.3
|
0.6
|
|
C4
|
A:T31314
|
4.4
|
20.6
|
0.1
|
|
CD1
|
A:PHE79
|
4.4
|
26.5
|
1.0
|
|
C1
|
A:T31314
|
4.4
|
24.2
|
0.1
|
|
C9
|
A:T31314
|
4.4
|
22.7
|
0.6
|
|
CE3
|
A:TRP232
|
4.5
|
25.5
|
1.0
|
|
C12
|
A:T31314
|
4.5
|
16.4
|
0.6
|
|
CE1
|
A:PHE79
|
4.5
|
29.1
|
1.0
|
|
CG
|
A:ARG229
|
4.5
|
28.6
|
1.0
|
|
C9
|
A:T31314
|
4.5
|
22.2
|
0.1
|
|
CB
|
A:ARG229
|
4.6
|
25.4
|
1.0
|
|
C12
|
A:T31314
|
4.6
|
19.5
|
0.1
|
|
CB
|
A:PHE79
|
4.7
|
18.7
|
1.0
|
|
O
|
A:HOH2064
|
4.8
|
39.0
|
1.0
|
|
C
|
A:SER228
|
4.8
|
26.8
|
1.0
|
|
NH1
|
A:ARG229
|
4.9
|
39.2
|
1.0
|
|
C11
|
A:T31314
|
4.9
|
24.7
|
0.6
|
|
CZ2
|
A:TRP232
|
4.9
|
26.5
|
1.0
|
|
Iodine binding site 2 out
of 12 in 4bva
Go back to
Iodine Binding Sites List in 4bva
Iodine binding site 2 out
of 12 in the Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
 Mono view
 Stereo pair view
|
|
A full contact list of Iodine with other atoms in the I binding
site number 2 of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:I1314
b:23.9
occ:0.55
|
I2
|
A:T31314
|
0.0
|
23.9
|
0.6
|
|
C10
|
A:T31314
|
1.9
|
19.2
|
0.1
|
|
C6
|
A:T31314
|
2.1
|
17.5
|
0.6
|
|
C8
|
A:T31314
|
2.8
|
19.4
|
0.1
|
|
C12
|
A:T31314
|
2.9
|
19.5
|
0.1
|
|
O1
|
A:T31314
|
3.0
|
16.7
|
0.1
|
|
C4
|
A:T31314
|
3.0
|
18.0
|
0.6
|
|
C8
|
A:T31314
|
3.0
|
14.5
|
0.6
|
|
O1
|
A:T31314
|
3.1
|
9.3
|
0.6
|
|
OE2
|
A:GLU256
|
3.5
|
33.7
|
1.0
|
|
CD
|
A:GLU256
|
3.6
|
27.9
|
1.0
|
|
O
|
A:HOH2264
|
3.7
|
37.8
|
1.0
|
|
O
|
A:SER228
|
3.7
|
32.1
|
1.0
|
|
CG
|
A:GLU256
|
3.7
|
23.0
|
1.0
|
|
CB
|
A:GLU256
|
3.9
|
20.3
|
1.0
|
|
C6
|
A:T31314
|
4.0
|
20.9
|
0.1
|
|
O
|
A:HOH2064
|
4.1
|
39.0
|
1.0
|
|
C2
|
A:T31314
|
4.1
|
20.3
|
0.1
|
|
O
|
A:HOH2062
|
4.2
|
36.7
|
1.0
|
|
C2
|
A:T31314
|
4.3
|
17.8
|
0.6
|
|
OE1
|
A:GLU256
|
4.3
|
26.4
|
1.0
|
|
C10
|
A:T31314
|
4.3
|
15.7
|
0.6
|
|
NE
|
A:ARG47
|
4.4
|
36.0
|
1.0
|
|
CG2
|
A:VAL49
|
4.5
|
19.1
|
1.0
|
|
C4
|
A:T31314
|
4.5
|
20.6
|
0.1
|
|
C
|
A:SER228
|
4.6
|
26.8
|
1.0
|
|
CZ
|
A:ARG47
|
4.6
|
44.8
|
1.0
|
|
NH2
|
A:ARG47
|
4.6
|
50.3
|
1.0
|
|
CA
|
A:GLU256
|
4.7
|
18.9
|
1.0
|
|
CA
|
A:ARG229
|
4.7
|
23.5
|
1.0
|
|
CD
|
A:PRO230
|
4.7
|
21.8
|
1.0
|
|
C12
|
A:T31314
|
4.8
|
16.4
|
0.6
|
|
O
|
A:GLU256
|
4.8
|
17.8
|
1.0
|
|
CD
|
A:ARG47
|
5.0
|
33.5
|
1.0
|
|
CG
|
A:ARG229
|
5.0
|
28.6
|
1.0
|
|
Iodine binding site 3 out
of 12 in 4bva
Go back to
Iodine Binding Sites List in 4bva
Iodine binding site 3 out
of 12 in the Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
 Mono view
 Stereo pair view
|
|
A full contact list of Iodine with other atoms in the I binding
site number 3 of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:I1314
b:18.8
occ:0.55
|
I3
|
A:T31314
|
0.0
|
18.8
|
0.6
|
|
I3
|
A:T31314
|
0.2
|
18.0
|
0.1
|
|
C9
|
A:T31314
|
2.0
|
22.2
|
0.1
|
|
C9
|
A:T31314
|
2.1
|
22.7
|
0.6
|
|
C11
|
A:T31314
|
2.9
|
23.7
|
0.1
|
|
C7
|
A:T31314
|
3.0
|
22.4
|
0.1
|
|
C11
|
A:T31314
|
3.1
|
24.7
|
0.6
|
|
C7
|
A:T31314
|
3.2
|
21.4
|
0.6
|
|
O2
|
A:T31314
|
3.3
|
21.0
|
0.1
|
|
O2
|
A:T31314
|
3.4
|
18.7
|
0.6
|
|
C12
|
A:T31314
|
3.7
|
19.5
|
0.1
|
|
N
|
A:GLY60
|
3.7
|
13.8
|
1.0
|
|
C2
|
A:T31314
|
3.8
|
20.3
|
0.1
|
|
C2
|
A:T31314
|
3.8
|
17.8
|
0.6
|
|
C4
|
A:T31314
|
4.0
|
18.0
|
0.6
|
|
O
|
A:VAL77
|
4.0
|
12.5
|
1.0
|
|
CA
|
A:GLY60
|
4.1
|
13.9
|
1.0
|
|
CB
|
A:PHE58
|
4.1
|
15.3
|
1.0
|
|
CG1
|
A:VAL77
|
4.1
|
16.6
|
1.0
|
|
O
|
A:PHE58
|
4.2
|
11.6
|
1.0
|
|
C1
|
A:T31314
|
4.3
|
24.2
|
0.1
|
|
C
|
A:LEU59
|
4.3
|
12.9
|
1.0
|
|
C5
|
A:T31314
|
4.3
|
24.7
|
0.1
|
|
N
|
A:PHE79
|
4.3
|
16.9
|
1.0
|
|
CB
|
A:PHE79
|
4.4
|
18.7
|
1.0
|
|
C
|
A:PHE58
|
4.4
|
13.0
|
1.0
|
|
C1
|
A:T31314
|
4.4
|
24.3
|
0.6
|
|
C5
|
A:T31314
|
4.5
|
23.7
|
0.6
|
|
C
|
A:VAL77
|
4.6
|
13.8
|
1.0
|
|
C12
|
A:T31314
|
4.7
|
16.4
|
0.6
|
|
CG2
|
A:VAL49
|
4.7
|
19.1
|
1.0
|
|
CG1
|
A:VAL49
|
4.7
|
19.8
|
1.0
|
|
C
|
A:THR78
|
4.7
|
16.1
|
1.0
|
|
N
|
A:LEU59
|
4.8
|
13.2
|
1.0
|
|
CA
|
A:LEU59
|
4.8
|
12.5
|
1.0
|
|
C10
|
A:T31314
|
4.8
|
19.2
|
0.1
|
|
C3
|
A:T31314
|
4.8
|
24.9
|
0.1
|
|
CA
|
A:THR78
|
4.8
|
14.8
|
1.0
|
|
CG2
|
A:VAL77
|
4.9
|
16.2
|
1.0
|
|
C4
|
A:T31314
|
4.9
|
20.6
|
0.1
|
|
O
|
A:LEU59
|
4.9
|
14.5
|
1.0
|
|
NH1
|
A:ARG47
|
5.0
|
44.6
|
1.0
|
|
C6
|
A:T31314
|
5.0
|
17.5
|
0.6
|
|
CA
|
A:PHE58
|
5.0
|
14.2
|
1.0
|
|
C3
|
A:T31314
|
5.0
|
25.7
|
0.6
|
|
Iodine binding site 4 out
of 12 in 4bva
Go back to
Iodine Binding Sites List in 4bva
Iodine binding site 4 out
of 12 in the Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
 Mono view
 Stereo pair view
|
|
A full contact list of Iodine with other atoms in the I binding
site number 4 of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:I1314
b:26.9
occ:0.15
|
I1
|
A:T31314
|
0.0
|
26.9
|
0.1
|
|
I1
|
A:T31314
|
0.2
|
26.5
|
0.6
|
|
C5
|
A:T31314
|
2.0
|
23.7
|
0.6
|
|
C5
|
A:T31314
|
2.1
|
24.7
|
0.1
|
|
C3
|
A:T31314
|
2.8
|
25.7
|
0.6
|
|
C3
|
A:T31314
|
3.0
|
24.9
|
0.1
|
|
C7
|
A:T31314
|
3.0
|
21.4
|
0.6
|
|
C7
|
A:T31314
|
3.1
|
22.4
|
0.1
|
|
O2
|
A:T31314
|
3.2
|
18.7
|
0.6
|
|
O2
|
A:T31314
|
3.3
|
21.0
|
0.1
|
|
C2
|
A:T31314
|
3.7
|
17.8
|
0.6
|
|
CD2
|
A:PHE79
|
3.7
|
24.4
|
1.0
|
|
CZ3
|
A:TRP232
|
3.8
|
28.3
|
1.0
|
|
CE2
|
A:PHE79
|
3.9
|
28.1
|
1.0
|
|
C2
|
A:T31314
|
3.9
|
20.3
|
0.1
|
|
CD
|
A:ARG229
|
4.0
|
31.9
|
1.0
|
|
CG
|
A:PHE79
|
4.0
|
21.8
|
1.0
|
|
O
|
A:HOH2201
|
4.1
|
34.3
|
1.0
|
|
OG
|
A:SER228
|
4.1
|
33.1
|
1.0
|
|
C4
|
A:T31314
|
4.1
|
18.0
|
0.6
|
|
O
|
A:SER228
|
4.1
|
32.1
|
1.0
|
|
CH2
|
A:TRP232
|
4.1
|
27.9
|
1.0
|
|
C1
|
A:T31314
|
4.1
|
24.3
|
0.6
|
|
CZ
|
A:PHE79
|
4.3
|
30.3
|
1.0
|
|
C1
|
A:T31314
|
4.3
|
24.2
|
0.1
|
|
C9
|
A:T31314
|
4.3
|
22.7
|
0.6
|
|
C4
|
A:T31314
|
4.4
|
20.6
|
0.1
|
|
C9
|
A:T31314
|
4.4
|
22.2
|
0.1
|
|
CD1
|
A:PHE79
|
4.4
|
26.5
|
1.0
|
|
C12
|
A:T31314
|
4.5
|
16.4
|
0.6
|
|
CE1
|
A:PHE79
|
4.5
|
29.1
|
1.0
|
|
C12
|
A:T31314
|
4.6
|
19.5
|
0.1
|
|
CE3
|
A:TRP232
|
4.6
|
25.5
|
1.0
|
|
CG
|
A:ARG229
|
4.6
|
28.6
|
1.0
|
|
CB
|
A:PHE79
|
4.6
|
18.7
|
1.0
|
|
CB
|
A:ARG229
|
4.7
|
25.4
|
1.0
|
|
O
|
A:HOH2064
|
4.7
|
39.0
|
1.0
|
|
C11
|
A:T31314
|
4.7
|
24.7
|
0.6
|
|
C
|
A:SER228
|
4.8
|
26.8
|
1.0
|
|
C11
|
A:T31314
|
4.9
|
23.7
|
0.1
|
|
N1
|
A:T31314
|
5.0
|
23.1
|
0.1
|
|
Iodine binding site 5 out
of 12 in 4bva
Go back to
Iodine Binding Sites List in 4bva
Iodine binding site 5 out
of 12 in the Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
 Mono view
 Stereo pair view
|
|
A full contact list of Iodine with other atoms in the I binding
site number 5 of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:I1314
b:28.6
occ:0.15
|
I2
|
A:T31314
|
0.0
|
28.6
|
0.1
|
|
C6
|
A:T31314
|
2.1
|
20.9
|
0.1
|
|
C10
|
A:T31314
|
2.2
|
15.7
|
0.6
|
|
C8
|
A:T31314
|
2.8
|
14.5
|
0.6
|
|
O1
|
A:T31314
|
2.9
|
9.3
|
0.6
|
|
O
|
A:HOH2203
|
2.9
|
38.5
|
1.0
|
|
C8
|
A:T31314
|
3.0
|
19.4
|
0.1
|
|
C4
|
A:T31314
|
3.1
|
20.6
|
0.1
|
|
O1
|
A:T31314
|
3.1
|
16.7
|
0.1
|
|
C12
|
A:T31314
|
3.3
|
16.4
|
0.6
|
|
CG
|
A:ARG229
|
3.7
|
28.6
|
1.0
|
|
O
|
A:HOH2070
|
3.7
|
41.4
|
1.0
|
|
CD
|
A:ARG229
|
3.8
|
31.9
|
1.0
|
|
CE2
|
A:PHE58
|
4.0
|
21.0
|
1.0
|
|
C6
|
A:T31314
|
4.1
|
17.5
|
0.6
|
|
NE
|
A:ARG229
|
4.1
|
35.3
|
1.0
|
|
C10
|
A:T31314
|
4.3
|
19.2
|
0.1
|
|
C2
|
A:T31314
|
4.4
|
20.3
|
0.1
|
|
CZ
|
A:PHE58
|
4.4
|
21.3
|
1.0
|
|
C2
|
A:T31314
|
4.4
|
17.8
|
0.6
|
|
CD2
|
A:PHE58
|
4.5
|
19.6
|
1.0
|
|
CD
|
A:PRO230
|
4.7
|
21.8
|
1.0
|
|
CZ
|
A:ARG229
|
4.7
|
37.3
|
1.0
|
|
C4
|
A:T31314
|
4.8
|
18.0
|
0.6
|
|
C12
|
A:T31314
|
4.9
|
19.5
|
0.1
|
|
NH1
|
A:ARG229
|
4.9
|
39.2
|
1.0
|
|
Iodine binding site 6 out
of 12 in 4bva
Go back to
Iodine Binding Sites List in 4bva
Iodine binding site 6 out
of 12 in the Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
 Mono view
 Stereo pair view
|
|
A full contact list of Iodine with other atoms in the I binding
site number 6 of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:I1314
b:18.0
occ:0.15
|
I3
|
A:T31314
|
0.0
|
18.0
|
0.1
|
|
I3
|
A:T31314
|
0.2
|
18.8
|
0.6
|
|
C9
|
A:T31314
|
2.1
|
22.2
|
0.1
|
|
C9
|
A:T31314
|
2.2
|
22.7
|
0.6
|
|
C11
|
A:T31314
|
3.0
|
23.7
|
0.1
|
|
C7
|
A:T31314
|
3.1
|
22.4
|
0.1
|
|
C11
|
A:T31314
|
3.2
|
24.7
|
0.6
|
|
C7
|
A:T31314
|
3.2
|
21.4
|
0.6
|
|
O2
|
A:T31314
|
3.3
|
21.0
|
0.1
|
|
O2
|
A:T31314
|
3.4
|
18.7
|
0.6
|
|
C12
|
A:T31314
|
3.7
|
19.5
|
0.1
|
|
N
|
A:GLY60
|
3.7
|
13.8
|
1.0
|
|
C2
|
A:T31314
|
3.8
|
20.3
|
0.1
|
|
C2
|
A:T31314
|
3.8
|
17.8
|
0.6
|
|
CA
|
A:GLY60
|
3.9
|
13.9
|
1.0
|
|
C4
|
A:T31314
|
3.9
|
18.0
|
0.6
|
|
O
|
A:VAL77
|
4.0
|
12.5
|
1.0
|
|
CB
|
A:PHE58
|
4.1
|
15.3
|
1.0
|
|
CG1
|
A:VAL77
|
4.1
|
16.6
|
1.0
|
|
C
|
A:LEU59
|
4.2
|
12.9
|
1.0
|
|
O
|
A:PHE58
|
4.3
|
11.6
|
1.0
|
|
C1
|
A:T31314
|
4.4
|
24.2
|
0.1
|
|
C5
|
A:T31314
|
4.4
|
24.7
|
0.1
|
|
C
|
A:PHE58
|
4.5
|
13.0
|
1.0
|
|
N
|
A:PHE79
|
4.5
|
16.9
|
1.0
|
|
C1
|
A:T31314
|
4.5
|
24.3
|
0.6
|
|
CG2
|
A:VAL49
|
4.6
|
19.1
|
1.0
|
|
C5
|
A:T31314
|
4.6
|
23.7
|
0.6
|
|
CB
|
A:PHE79
|
4.6
|
18.7
|
1.0
|
|
CG1
|
A:VAL49
|
4.6
|
19.8
|
1.0
|
|
C
|
A:VAL77
|
4.6
|
13.8
|
1.0
|
|
C12
|
A:T31314
|
4.7
|
16.4
|
0.6
|
|
C10
|
A:T31314
|
4.7
|
19.2
|
0.1
|
|
CA
|
A:LEU59
|
4.8
|
12.5
|
1.0
|
|
N
|
A:LEU59
|
4.8
|
13.2
|
1.0
|
|
O
|
A:LEU59
|
4.8
|
14.5
|
1.0
|
|
C
|
A:THR78
|
4.9
|
16.1
|
1.0
|
|
C6
|
A:T31314
|
4.9
|
17.5
|
0.6
|
|
NH1
|
A:ARG47
|
4.9
|
44.6
|
1.0
|
|
C4
|
A:T31314
|
4.9
|
20.6
|
0.1
|
|
C3
|
A:T31314
|
4.9
|
24.9
|
0.1
|
|
CA
|
A:THR78
|
4.9
|
14.8
|
1.0
|
|
CG2
|
A:VAL77
|
5.0
|
16.2
|
1.0
|
|
Iodine binding site 7 out
of 12 in 4bva
Go back to
Iodine Binding Sites List in 4bva
Iodine binding site 7 out
of 12 in the Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
 Mono view
 Stereo pair view
|
|
A full contact list of Iodine with other atoms in the I binding
site number 7 of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:I1314
b:22.6
occ:0.65
|
I1
|
B:T31314
|
0.0
|
22.6
|
0.7
|
|
I1
|
B:T31314
|
0.3
|
21.0
|
0.2
|
|
C5
|
B:T31314
|
2.1
|
18.2
|
0.7
|
|
C5
|
B:T31314
|
2.1
|
18.2
|
0.2
|
|
C3
|
B:T31314
|
3.0
|
17.3
|
0.7
|
|
C3
|
B:T31314
|
3.1
|
17.6
|
0.2
|
|
C7
|
B:T31314
|
3.1
|
17.1
|
0.7
|
|
C7
|
B:T31314
|
3.1
|
18.1
|
0.2
|
|
O2
|
B:T31314
|
3.2
|
17.4
|
0.7
|
|
O2
|
B:T31314
|
3.2
|
19.1
|
0.2
|
|
CZ3
|
B:TRP232
|
3.6
|
23.6
|
1.0
|
|
C2
|
B:T31314
|
3.7
|
15.1
|
0.7
|
|
CD2
|
B:PHE79
|
3.7
|
20.7
|
1.0
|
|
CD
|
B:ARG229
|
3.7
|
24.0
|
1.0
|
|
CE2
|
B:PHE79
|
3.8
|
22.4
|
1.0
|
|
C2
|
B:T31314
|
3.8
|
19.2
|
0.2
|
|
OG
|
B:SER228
|
3.8
|
27.8
|
1.0
|
|
O
|
B:HOH2202
|
3.9
|
30.8
|
1.0
|
|
CH2
|
B:TRP232
|
4.0
|
22.7
|
1.0
|
|
O
|
B:SER228
|
4.1
|
27.2
|
1.0
|
|
CG
|
B:ARG229
|
4.2
|
24.8
|
1.0
|
|
C4
|
B:T31314
|
4.2
|
16.2
|
0.7
|
|
CG
|
B:PHE79
|
4.2
|
19.7
|
1.0
|
|
C12
|
B:T31314
|
4.3
|
13.4
|
0.7
|
|
CE3
|
B:TRP232
|
4.3
|
20.3
|
1.0
|
|
C1
|
B:T31314
|
4.3
|
16.2
|
0.7
|
|
C4
|
B:T31314
|
4.3
|
20.1
|
0.2
|
|
C1
|
B:T31314
|
4.4
|
16.7
|
0.2
|
|
C9
|
B:T31314
|
4.4
|
17.2
|
0.7
|
|
C9
|
B:T31314
|
4.4
|
18.1
|
0.2
|
|
CZ
|
B:PHE79
|
4.4
|
23.6
|
1.0
|
|
C12
|
B:T31314
|
4.5
|
19.4
|
0.2
|
|
CB
|
B:ARG229
|
4.6
|
22.7
|
1.0
|
|
CE
|
B:MET205
|
4.6
|
19.1
|
0.5
|
|
C
|
B:SER228
|
4.7
|
22.0
|
1.0
|
|
O
|
B:HOH2074
|
4.8
|
23.5
|
1.0
|
|
CD1
|
B:PHE79
|
4.8
|
23.8
|
1.0
|
|
CB
|
B:PHE79
|
4.8
|
15.8
|
1.0
|
|
C11
|
B:T31314
|
4.9
|
16.9
|
0.7
|
|
CE1
|
B:PHE79
|
4.9
|
23.5
|
1.0
|
|
C11
|
B:T31314
|
4.9
|
17.4
|
0.2
|
|
CZ2
|
B:TRP232
|
5.0
|
22.5
|
1.0
|
|
Iodine binding site 8 out
of 12 in 4bva
Go back to
Iodine Binding Sites List in 4bva
Iodine binding site 8 out
of 12 in the Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
 Mono view
 Stereo pair view
|
|
A full contact list of Iodine with other atoms in the I binding
site number 8 of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:I1314
b:16.5
occ:0.65
|
I2
|
B:T31314
|
0.0
|
16.5
|
0.7
|
|
C10
|
B:T31314
|
1.8
|
19.4
|
0.2
|
|
C6
|
B:T31314
|
2.1
|
14.3
|
0.7
|
|
C12
|
B:T31314
|
2.7
|
19.4
|
0.2
|
|
C8
|
B:T31314
|
2.8
|
20.1
|
0.2
|
|
C4
|
B:T31314
|
3.0
|
16.2
|
0.7
|
|
O1
|
B:T31314
|
3.0
|
19.9
|
0.2
|
|
C8
|
B:T31314
|
3.0
|
14.1
|
0.7
|
|
O1
|
B:T31314
|
3.2
|
13.4
|
0.7
|
|
OE2
|
B:GLU256
|
3.5
|
18.1
|
1.0
|
|
CD
|
B:GLU256
|
3.6
|
18.4
|
1.0
|
|
O
|
B:HOH2273
|
3.7
|
33.0
|
1.0
|
|
O
|
B:SER228
|
3.7
|
27.2
|
1.0
|
|
CG
|
B:GLU256
|
3.7
|
18.1
|
1.0
|
|
O
|
B:HOH2074
|
3.8
|
23.5
|
1.0
|
|
CB
|
B:GLU256
|
3.9
|
17.0
|
1.0
|
|
O
|
B:HOH2073
|
4.0
|
19.7
|
1.0
|
|
C2
|
B:T31314
|
4.0
|
19.2
|
0.2
|
|
C6
|
B:T31314
|
4.0
|
22.0
|
0.2
|
|
NH1
|
B:ARG47
|
4.1
|
31.5
|
1.0
|
|
OE1
|
B:GLU256
|
4.1
|
18.9
|
1.0
|
|
CG2
|
B:VAL49
|
4.1
|
15.6
|
1.0
|
|
CD
|
B:ARG47
|
4.1
|
26.6
|
1.0
|
|
C2
|
B:T31314
|
4.3
|
15.1
|
0.7
|
|
C10
|
B:T31314
|
4.3
|
13.6
|
0.7
|
|
C4
|
B:T31314
|
4.5
|
20.1
|
0.2
|
|
C
|
B:SER228
|
4.6
|
22.0
|
1.0
|
|
CA
|
B:GLU256
|
4.6
|
16.2
|
1.0
|
|
CA
|
B:ARG229
|
4.7
|
20.9
|
1.0
|
|
CZ
|
B:ARG47
|
4.8
|
31.7
|
1.0
|
|
NE
|
B:ARG47
|
4.8
|
31.6
|
1.0
|
|
C12
|
B:T31314
|
4.8
|
13.4
|
0.7
|
|
CD
|
B:PRO230
|
4.9
|
18.8
|
1.0
|
|
O
|
B:GLU256
|
4.9
|
15.3
|
1.0
|
|
Iodine binding site 9 out
of 12 in 4bva
Go back to
Iodine Binding Sites List in 4bva
Iodine binding site 9 out
of 12 in the Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
 Mono view
 Stereo pair view
|
|
A full contact list of Iodine with other atoms in the I binding
site number 9 of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:I1314
b:17.4
occ:0.65
|
I3
|
B:T31314
|
0.0
|
17.4
|
0.7
|
|
I3
|
B:T31314
|
0.2
|
19.0
|
0.2
|
|
C9
|
B:T31314
|
2.0
|
18.1
|
0.2
|
|
C9
|
B:T31314
|
2.1
|
17.2
|
0.7
|
|
C11
|
B:T31314
|
2.9
|
17.4
|
0.2
|
|
C7
|
B:T31314
|
3.1
|
18.1
|
0.2
|
|
C11
|
B:T31314
|
3.1
|
16.9
|
0.7
|
|
C7
|
B:T31314
|
3.1
|
17.1
|
0.7
|
|
O2
|
B:T31314
|
3.2
|
17.4
|
0.7
|
|
O2
|
B:T31314
|
3.3
|
19.1
|
0.2
|
|
N
|
B:GLY60
|
3.6
|
11.2
|
1.0
|
|
C2
|
B:T31314
|
3.8
|
15.1
|
0.7
|
|
C2
|
B:T31314
|
3.9
|
19.2
|
0.2
|
|
C4
|
B:T31314
|
4.0
|
16.2
|
0.7
|
|
O
|
B:VAL77
|
4.0
|
11.2
|
1.0
|
|
CA
|
B:GLY60
|
4.0
|
11.1
|
1.0
|
|
C12
|
B:T31314
|
4.0
|
19.4
|
0.2
|
|
CB
|
B:PHE58
|
4.1
|
11.8
|
1.0
|
|
O
|
B:PHE58
|
4.2
|
11.7
|
1.0
|
|
C1
|
B:T31314
|
4.2
|
16.7
|
0.2
|
|
C
|
B:LEU59
|
4.3
|
11.0
|
1.0
|
|
CG1
|
B:VAL77
|
4.3
|
14.2
|
1.0
|
|
C
|
B:PHE58
|
4.3
|
12.0
|
1.0
|
|
C5
|
B:T31314
|
4.3
|
18.2
|
0.2
|
|
N
|
B:PHE79
|
4.4
|
12.2
|
1.0
|
|
C1
|
B:T31314
|
4.4
|
16.2
|
0.7
|
|
C5
|
B:T31314
|
4.4
|
18.2
|
0.7
|
|
CB
|
B:PHE79
|
4.4
|
15.8
|
1.0
|
|
C
|
B:VAL77
|
4.6
|
12.1
|
1.0
|
|
N
|
B:LEU59
|
4.6
|
11.3
|
1.0
|
|
CA
|
B:LEU59
|
4.7
|
10.8
|
1.0
|
|
C
|
B:THR78
|
4.7
|
12.1
|
1.0
|
|
C12
|
B:T31314
|
4.7
|
13.4
|
0.7
|
|
C3
|
B:T31314
|
4.8
|
17.6
|
0.2
|
|
CA
|
B:THR78
|
4.8
|
12.3
|
1.0
|
|
CG1
|
B:VAL49
|
4.8
|
14.7
|
1.0
|
|
CG2
|
B:VAL77
|
4.9
|
14.6
|
1.0
|
|
CA
|
B:PHE58
|
4.9
|
11.6
|
1.0
|
|
C3
|
B:T31314
|
4.9
|
17.3
|
0.7
|
|
CG2
|
B:VAL49
|
4.9
|
15.6
|
1.0
|
|
O
|
B:LEU59
|
4.9
|
12.0
|
1.0
|
|
Iodine binding site 10 out
of 12 in 4bva
Go back to
Iodine Binding Sites List in 4bva
Iodine binding site 10 out
of 12 in the Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin.
 Mono view
 Stereo pair view
|
|
A full contact list of Iodine with other atoms in the I binding
site number 10 of Crystal Structure of the Nadph-T3 Form of Mouse Mu-Crystallin. within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:I1314
b:21.0
occ:0.20
|
I1
|
B:T31314
|
0.0
|
21.0
|
0.2
|
|
I1
|
B:T31314
|
0.3
|
22.6
|
0.7
|
|
C5
|
B:T31314
|
2.1
|
18.2
|
0.7
|
|
C5
|
B:T31314
|
2.1
|
18.2
|
0.2
|
|
C3
|
B:T31314
|
2.9
|
17.3
|
0.7
|
|
C3
|
B:T31314
|
2.9
|
17.6
|
0.2
|
|
C7
|
B:T31314
|
3.1
|
17.1
|
0.7
|
|
C7
|
B:T31314
|
3.1
|
18.1
|
0.2
|
|
O2
|
B:T31314
|
3.4
|
17.4
|
0.7
|
|
O2
|
B:T31314
|
3.4
|
19.1
|
0.2
|
|
CZ3
|
B:TRP232
|
3.6
|
23.6
|
1.0
|
|
OG
|
B:SER228
|
3.6
|
27.8
|
1.0
|
|
O
|
B:HOH2202
|
3.6
|
30.8
|
1.0
|
|
C2
|
B:T31314
|
3.8
|
15.1
|
0.7
|
|
CD2
|
B:PHE79
|
3.9
|
20.7
|
1.0
|
|
CD
|
B:ARG229
|
3.9
|
24.0
|
1.0
|
|
C2
|
B:T31314
|
3.9
|
19.2
|
0.2
|
|
CE2
|
B:PHE79
|
4.0
|
22.4
|
1.0
|
|
O
|
B:SER228
|
4.0
|
27.2
|
1.0
|
|
CH2
|
B:TRP232
|
4.1
|
22.7
|
1.0
|
|
C1
|
B:T31314
|
4.2
|
16.2
|
0.7
|
|
C4
|
B:T31314
|
4.2
|
16.2
|
0.7
|
|
CG
|
B:ARG229
|
4.2
|
24.8
|
1.0
|
|
CE3
|
B:TRP232
|
4.3
|
20.3
|
1.0
|
|
C1
|
B:T31314
|
4.3
|
16.7
|
0.2
|
|
CG
|
B:PHE79
|
4.3
|
19.7
|
1.0
|
|
C9
|
B:T31314
|
4.4
|
17.2
|
0.7
|
|
C9
|
B:T31314
|
4.4
|
18.1
|
0.2
|
|
C12
|
B:T31314
|
4.5
|
13.4
|
0.7
|
|
C4
|
B:T31314
|
4.5
|
20.1
|
0.2
|
|
CZ
|
B:PHE79
|
4.5
|
23.6
|
1.0
|
|
C12
|
B:T31314
|
4.6
|
19.4
|
0.2
|
|
CE
|
B:MET205
|
4.6
|
19.1
|
0.5
|
|
C
|
B:SER228
|
4.6
|
22.0
|
1.0
|
|
CB
|
B:ARG229
|
4.6
|
22.7
|
1.0
|
|
O
|
B:HOH2074
|
4.6
|
23.5
|
1.0
|
|
CB
|
B:SER228
|
4.8
|
23.2
|
1.0
|
|
C11
|
B:T31314
|
4.8
|
16.9
|
0.7
|
|
CD1
|
B:PHE79
|
4.9
|
23.8
|
1.0
|
|
C11
|
B:T31314
|
4.9
|
17.4
|
0.2
|
|
O2D
|
B:NDP1313
|
4.9
|
14.6
|
1.0
|
|
SD
|
B:MET205
|
4.9
|
19.6
|
0.5
|
|
CB
|
B:PHE79
|
5.0
|
15.8
|
1.0
|
|
CE1
|
B:PHE79
|
5.0
|
23.5
|
1.0
|
|
Reference:
F.Borel,
I.Hachi,
A.Palencia,
M.C.Gaillard,
J.L.Ferrer.
Crystal Structure of Mouse Mu-Crystallin Complexed with Nadph and the T3 Thyroid Hormone Febs J. V. 281 1598 2014.
ISSN: ISSN 1742-464X
PubMed: 24467707
DOI: 10.1111/FEBS.12726
Page generated: Sun Aug 11 17:28:07 2024
|
