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Iodine in PDB 4iy9: BMLP3 - C2 Crystal Form

Protein crystallography data

The structure of BMLP3 - C2 Crystal Form, PDB code: 4iy9 was solved by A.J.Pietrzyk, A.Bujacz, J.Mueller-Dieckmann, M.Jaskolski, G.Bujacz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.10 / 2.10
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 154.150, 34.560, 93.140, 90.00, 97.99, 90.00
R / Rfree (%) 21.6 / 27.2

Iodine Binding Sites:

The binding sites of Iodine atom in the BMLP3 - C2 Crystal Form (pdb code 4iy9). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the BMLP3 - C2 Crystal Form, PDB code: 4iy9:

Iodine binding site 1 out of 1 in 4iy9

Go back to Iodine Binding Sites List in 4iy9
Iodine binding site 1 out of 1 in the BMLP3 - C2 Crystal Form


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of BMLP3 - C2 Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:I301

b:32.7
occ:0.92
O A:HOH463 3.2 41.1 1.0
O A:HOH406 3.5 27.6 1.0
N B:GLY158 3.7 36.4 1.0
O B:HOH307 3.7 27.2 1.0
N A:GLY158 3.9 32.7 1.0
CE1 B:PHE168 3.9 30.5 1.0
N B:VAL157 4.0 41.2 1.0
CA B:GLY156 4.0 38.7 1.0
CE1 A:PHE168 4.1 23.1 1.0
CA A:GLY156 4.1 25.7 1.0
CZ B:PHE168 4.2 25.9 1.0
N A:VAL157 4.2 25.6 1.0
CA B:GLY158 4.3 37.5 1.0
CA A:GLY158 4.3 23.2 1.0
C B:GLY156 4.4 40.9 1.0
CZ A:PHE168 4.5 25.6 1.0
C A:GLY156 4.5 24.7 1.0
C B:VAL157 4.7 38.8 1.0
CA B:VAL157 4.8 40.8 1.0
C A:VAL157 4.9 35.8 1.0
O A:GLY158 4.9 28.2 1.0

Reference:

A.J.Pietrzyk, A.Bujacz, J.Mueller-Dieckmann, M.Lochynska, M.Jaskolski, G.Bujacz. Two Crystal Structures of Bombyx Mori Lipoprotein 3 - Structural Characterization of A New 30-kDa Lipoprotein Family Member. Plos One V. 8 61303 2013.
ISSN: ESSN 1932-6203
PubMed: 23613829
DOI: 10.1371/JOURNAL.PONE.0061303
Page generated: Sun Aug 11 18:12:42 2024

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