Iodine in PDB 5io8: Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad.

The structure of Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad., PDB code: 5io8 was solved by N.K.Pandey, S.Ray, M.Suar, N.S.Bhavesh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.30 / 2.19
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	60.115, 60.277, 62.603, 90.00, 90.00, 90.00
R / Rfree (%)	20.4 / 24.5

The structure of Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad. also contains other interesting chemical elements:

Sodium

(Na)

5 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 14;

Binding sites:

The binding sites of Iodine atom in the Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad. (pdb code 5io8). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 14 binding sites of Iodine where determined in the Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad., PDB code: 5io8:
Jump to Iodine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iodine binding site 1 out of 14 in the Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad. within 5.0Å range: probe atom residue distance (Å) B Occ A:I201 b:88.0 occ:1.00 O A:HOH319 2.7 47.1 1.0 CG A:GLN106 3.7 56.9 1.0 N A:GLN103 4.2 45.5 1.0 CA A:GLN103 4.2 46.7 1.0 CG A:GLN103 4.2 51.2 1.0 C A:GLU102 4.2 47.8 1.0 O A:GLU102 4.2 48.1 1.0 CB A:GLU102 4.4 47.6 1.0 CB A:GLN106 4.5 55.9 1.0 O A:LEU22 4.6 65.7 1.0 CD2 A:LEU22 4.7 55.8 1.0 CD A:GLN106 4.7 59.5 1.0 O A:HOH313 4.7 36.0 1.0 CB A:GLN103 4.8 47.7 1.0 CA A:GLU102 5.0 47.3 1.0

Iodine binding site 2 out of 14 in the Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad. within 5.0Å range: probe atom residue distance (Å) B Occ A:I202 b:91.7 occ:1.00 O A:HOH342 2.9 54.8 1.0 CB A:ARG85 4.1 36.4 1.0 CG A:ARG85 4.1 46.1 1.0 CD A:ARG85 4.1 52.5 1.0 CG2 A:VAL89 4.3 32.1 1.0 CD2 B:LEU74 4.6 38.8 1.0 O A:ARG85 4.8 27.7 1.0 NE A:ARG85 4.8 60.3 1.0 CA A:ARG85 4.8 31.0 1.0

Iodine binding site 3 out of 14 in the Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 3 of Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad. within 5.0Å range: probe atom residue distance (Å) B Occ A:I203 b:88.3 occ:1.00 O A:HOH312 3.3 38.2 1.0 CD2 A:LEU12 3.5 58.5 1.0 NE2 A:GLN37 3.6 58.4 1.0 I A:IOD204 3.6 0.2 1.0 O A:LYS33 3.9 43.8 1.0 CG A:LYS33 3.9 58.9 1.0 CB A:LYS33 4.1 53.4 1.0 CA A:LYS33 4.1 46.8 1.0 ND1 A:HIS36 4.2 36.4 1.0 CD A:PRO13 4.3 49.9 1.0 CG A:GLN37 4.4 51.2 1.0 CD A:GLN37 4.4 56.9 1.0 CB A:HIS36 4.4 33.0 1.0 CG A:PRO13 4.4 50.8 1.0 C A:LYS33 4.5 44.6 1.0 CG A:HIS36 4.6 33.6 1.0 CG A:LEU12 4.8 62.6 1.0 N A:GLN37 4.9 35.3 1.0 CB A:LEU12 5.0 60.6 1.0

Iodine binding site 4 out of 14 in the Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 4 of Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad. within 5.0Å range: probe atom residue distance (Å) B Occ A:I204 b:0.2 occ:1.00 NZ A:LYS33 3.2 63.0 1.0 I A:IOD203 3.6 88.3 1.0 CE A:LYS33 3.7 64.7 1.0 CB A:ALA14 3.8 67.1 1.0 N A:ALA14 3.8 60.7 1.0 CG A:LYS33 4.2 58.9 1.0 CB A:LEU12 4.2 60.6 1.0 CG A:PRO13 4.3 50.8 1.0 N A:PRO13 4.4 51.5 1.0 CD A:PRO13 4.4 49.9 1.0 CA A:ALA14 4.4 66.8 1.0 CD2 A:LEU12 4.5 58.5 1.0 CD A:LYS33 4.5 62.6 1.0 CB A:PRO13 4.5 52.6 1.0 CG A:LEU12 4.7 62.6 1.0 CD1 A:LEU12 4.8 66.6 1.0 C A:PRO13 4.8 58.5 1.0 CA A:PRO13 4.9 54.2 1.0 C A:LEU12 4.9 54.1 1.0 O3 A:PO4212 5.0 59.0 1.0

Iodine binding site 5 out of 14 in the Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 5 of Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad. within 5.0Å range: probe atom residue distance (Å) B Occ A:I205 b:0.4 occ:1.00 CA A:GLN105 4.1 52.6 1.0 CA B:LYS61 4.2 66.7 1.0 CG A:ARG104 4.2 53.5 1.0 N A:GLN105 4.3 53.5 1.0 CB A:GLN108 4.4 54.4 1.0 CB B:LYS61 4.4 66.2 1.0 C A:ARG104 4.5 55.4 1.0 CD A:ARG104 4.5 54.7 1.0 CB A:GLN105 4.5 50.1 1.0 O A:ARG104 4.5 53.0 1.0 CB A:ARG104 4.8 51.3 1.0 O B:LYS61 4.9 67.1 1.0

Iodine binding site 6 out of 14 in the Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 6 of Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad. within 5.0Å range: probe atom residue distance (Å) B Occ A:I206 b:72.4 occ:1.00 N A:GLY54 3.4 78.3 1.0 N A:LEU56 3.6 55.4 1.0 CB A:LEU56 3.7 53.4 1.0 CA A:GLY54 3.9 84.8 1.0 CG A:LEU56 4.0 51.4 1.0 C A:GLY54 4.0 88.4 1.0 N A:ALA55 4.0 59.6 1.0 NE2 A:GLN73 4.1 64.9 1.0 CA A:LEU56 4.1 55.2 1.0 N A:ILE57 4.2 63.0 1.0 CD1 A:LEU56 4.3 50.5 1.0 CG1 A:ILE57 4.5 67.9 1.0 C A:ALA55 4.6 58.3 1.0 O A:GLY54 4.7 89.1 1.0 C A:LEU56 4.7 58.5 1.0 CA A:ALA55 4.7 60.9 1.0 CD A:GLN73 5.0 61.7 1.0

Iodine binding site 7 out of 14 in the Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 7 of Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad. within 5.0Å range: probe atom residue distance (Å) B Occ A:I207 b:31.8 occ:1.00 NE2 A:GLN82 3.7 43.8 1.0 CB A:TYR86 4.1 30.3 1.0 CD1 A:TYR86 4.2 33.9 1.0 CG B:LYS71 4.3 44.5 1.0 CG A:TYR86 4.3 32.0 1.0 CE B:LYS71 4.4 48.5 1.0 CA A:GLN83 4.4 34.1 1.0 O A:GLN82 4.4 32.3 1.0 CG A:GLN82 4.5 43.4 1.0 CD A:GLN82 4.6 42.9 1.0 CG A:GLN83 4.6 38.7 1.0 C A:GLN82 4.7 33.6 1.0 N A:GLN83 4.7 31.8 1.0 CD B:LYS71 4.7 47.0 1.0 CB B:LYS71 4.9 43.9 1.0

Iodine binding site 8 out of 14 in the Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 8 of Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad. within 5.0Å range: probe atom residue distance (Å) B Occ B:I201 b:89.6 occ:1.00 O B:HOH303 3.6 43.0 1.0 CB B:TYR86 3.9 35.0 1.0 O B:GLN82 4.0 38.0 1.0 CD1 B:TYR86 4.0 45.2 1.0 CG B:TYR86 4.1 42.7 1.0 C B:GLN82 4.3 39.4 1.0 CA B:GLN83 4.3 42.9 1.0 N B:GLN83 4.5 40.4 1.0 CB A:LYS71 4.7 44.6 1.0 CG B:GLN83 4.7 49.6 1.0 CB B:GLN82 4.8 39.5 1.0 CA A:LYS71 4.8 46.9 1.0 CE1 B:TYR86 4.9 47.8 1.0

Iodine binding site 9 out of 14 in the Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 9 of Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad. within 5.0Å range: probe atom residue distance (Å) B Occ B:I202 b:39.9 occ:1.00 N B:GLU102 3.5 43.0 1.0 O B:HOH301 3.5 48.6 1.0 CB B:GLU102 3.8 55.6 1.0 CD B:PRO101 3.8 42.2 1.0 CB B:PRO101 4.0 46.0 1.0 N B:PRO101 4.1 43.8 1.0 CG B:PRO101 4.2 41.7 1.0 CA B:GLU102 4.2 49.0 1.0 C B:PRO101 4.4 44.5 1.0 CA B:PRO101 4.4 45.6 1.0 CB B:THR100 4.5 47.8 1.0 OE1 B:GLU102 4.6 65.8 1.0 OG1 B:THR100 4.6 50.9 1.0 C B:THR100 4.9 43.9 1.0

Iodine binding site 10 out of 14 in the Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 10 of Salmonella Typhimurium Virg-Like (Stv) Protein at 2.19 Angstrom Resolution Solved By Iodine Sad. within 5.0Å range: probe atom residue distance (Å) B Occ B:I203 b:0.4 occ:1.00 N B:LEU56 3.5 79.3 1.0 N B:ALA55 3.6 84.2 1.0 OE1 B:GLN73 3.7 73.1 1.0 CB B:LEU56 3.9 71.0 1.0 CA B:LEU56 4.2 73.3 1.0 N B:ILE57 4.2 68.3 1.0 CA B:ALA55 4.4 83.7 1.0 C B:ALA55 4.4 82.7 1.0 CG1 B:ILE57 4.5 66.1 1.0 CB B:ALA55 4.5 82.9 1.0 CD B:GLN73 4.6 69.2 1.0 C B:LEU56 4.8 70.2 1.0 CG B:GLN73 4.9 61.6 1.0

N.K.Pandey, S.Ray, M.Suar, N.S.Bhavesh. Salmonella Typhimurium Virg-Like (Stv) Protein at at 2.19 Angstrom Resolution By Sad. To Be Published.