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Iodine in PDB 5zh0: Crystal Structures of Endo-Beta-1,4-Xylanase II

Enzymatic activity of Crystal Structures of Endo-Beta-1,4-Xylanase II

All present enzymatic activity of Crystal Structures of Endo-Beta-1,4-Xylanase II:
3.2.1.8;

Protein crystallography data

The structure of Crystal Structures of Endo-Beta-1,4-Xylanase II, PDB code: 5zh0 was solved by X.Zhang, Q.Wan, Z.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.80 / 1.08
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 48.403, 59.082, 69.926, 90.00, 90.00, 90.00
R / Rfree (%) 12.5 / 13

Iodine Binding Sites:

The binding sites of Iodine atom in the Crystal Structures of Endo-Beta-1,4-Xylanase II (pdb code 5zh0). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the Crystal Structures of Endo-Beta-1,4-Xylanase II, PDB code: 5zh0:

Iodine binding site 1 out of 1 in 5zh0

Go back to Iodine Binding Sites List in 5zh0
Iodine binding site 1 out of 1 in the Crystal Structures of Endo-Beta-1,4-Xylanase II


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Crystal Structures of Endo-Beta-1,4-Xylanase II within 5.0Å range:
probe atom residue distance (Å) B Occ
A:I202

b:10.2
occ:1.00
H A:SER146 2.8 11.1 1.0
HG A:SER146 3.3 13.0 0.6
HB2 A:ARG145 3.4 11.0 1.0
HA A:ARG145 3.5 11.1 1.0
O A:HOH421 3.5 12.5 1.0
O A:HOH324 3.5 10.2 1.0
N A:SER146 3.6 9.3 1.0
H A:SER147 3.7 11.7 1.0
OG A:SER146 3.9 10.8 0.6
HB2 A:SER146 4.0 13.7 0.4
O A:HOH303 4.1 17.6 1.0
CB A:ARG145 4.1 9.2 1.0
CA A:ARG145 4.1 9.2 1.0
N A:SER147 4.3 9.8 1.0
HB2 A:SER147 4.3 12.5 1.0
HB3 A:ARG145 4.4 11.0 1.0
C A:ARG145 4.4 9.0 1.0
O A:HOH563 4.5 17.2 1.0
HG A:SER147 4.5 12.3 1.0
CA A:SER146 4.5 10.3 1.0
HG A:SER146 4.6 13.7 0.4
CB A:SER146 4.7 11.4 1.0
C A:SER146 4.8 9.8 1.0

Reference:

X.Zhang, Q.Wan, Z.Li. Crystal Structures of Endo-Beta-1,4-Xylanase II To Be Published.
Page generated: Sun Dec 13 19:42:14 2020

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