Iodine in PDB 6jqa: Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma.

The structure of Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma., PDB code: 6jqa was solved by H.Miyatake, K.Maejima, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.51 / 2.40
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	42.843, 60.664, 124.874, 90.00, 90.00, 90.00
R / Rfree (%)	26.9 / 30.3

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 38;

Binding sites:

The binding sites of Iodine atom in the Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma. (pdb code 6jqa). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 38 binding sites of Iodine where determined in the Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma., PDB code: 6jqa:
Jump to Iodine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iodine binding site 1 out of 38 in the Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma. within 5.0Å range: probe atom residue distance (Å) B Occ A:I18 b:55.1 occ:0.27 IE A:IYR18 0.0 55.1 0.3 CE A:IYR18 2.0 53.0 1.0 HA B:THR41 2.7 67.1 1.0 CD A:IYR18 2.9 53.5 1.0 HD A:IYR18 2.9 64.2 1.0 HB2 B:GLU44 2.9 85.8 1.0 HG1 B:THR41 3.0 66.8 1.0 CF A:IYR18 3.0 51.0 1.0 OE1 B:GLU44 3.0 73.5 1.0 O B:ASN40 3.1 58.8 1.0 HB3 B:ASN40 3.2 58.5 1.0 C B:ASN40 3.2 54.6 1.0 CG B:ASN40 3.3 53.9 1.0 OF A:IYR18 3.3 51.4 1.0 N B:THR41 3.3 54.1 1.0 CA B:THR41 3.4 55.8 1.0 ND2 B:ASN40 3.5 54.1 1.0 OD1 B:ASN40 3.6 57.7 1.0 CB B:ASN40 3.6 48.7 1.0 HD22 B:ASN40 3.7 65.0 1.0 OG1 B:THR41 3.7 55.6 1.0 CB B:GLU44 3.7 71.5 1.0 HB3 B:GLU44 3.7 85.8 1.0 HD21 B:ASN40 3.7 65.0 1.0 H B:THR41 3.8 65.0 1.0 H B:GLU44 3.9 84.9 1.0 CD B:GLU44 4.1 77.8 1.0 CA B:ASN40 4.1 49.5 1.0 CB B:THR41 4.2 55.1 1.0 CC A:IYR18 4.2 50.3 1.0 HD13 B:LEU58 4.2 96.1 1.0 CG A:IYR18 4.3 48.7 1.0 HD22 B:LEU58 4.4 91.5 1.0 HG23 B:THR41 4.4 68.9 1.0 OE2 A:GLU22 4.5 43.4 1.0 HA B:ASN40 4.5 59.5 1.0 C B:THR41 4.5 55.7 1.0 HB2 B:ASN40 4.5 58.5 1.0 CG B:GLU44 4.5 78.1 1.0 CD A:GLU22 4.6 45.2 1.0 N B:GLU44 4.6 70.7 1.0 HD21 B:LEU58 4.7 91.5 1.0 O B:THR41 4.7 56.3 1.0 CH A:IYR18 4.8 48.9 1.0 OE1 A:GLU22 4.8 46.0 1.0 CA B:GLU44 4.8 72.3 1.0 CG2 B:THR41 4.9 57.4 1.0 HB B:THR41 5.0 66.3 1.0 CD2 B:LEU58 5.0 76.2 1.0 HA A:IYR18 5.0 60.9 1.0

Iodine binding site 2 out of 38 in the Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma. within 5.0Å range: probe atom residue distance (Å) B Occ A:I29 b:44.0 occ:0.26 IE A:IYR29 0.0 44.0 0.3 CE A:IYR29 2.0 44.6 1.0 HG11 B:VAL36 2.9 55.4 1.0 CD A:IYR29 3.0 42.8 1.0 CF A:IYR29 3.0 48.0 1.0 HD A:IYR29 3.0 51.4 1.0 HG23 A:ILE25 3.1 42.8 1.0 HH22 A:ARG32 3.2 70.8 1.0 HG21 B:VAL36 3.3 54.3 1.0 OF A:IYR29 3.3 50.5 1.0 HH21 A:ARG32 3.5 70.8 1.0 HD3 A:LYS28 3.6 42.3 1.0 I A:IOD103 3.7 0.3 1.0 NH2 A:ARG32 3.7 58.9 1.0 HA A:ILE25 3.7 42.7 1.0 HG12 A:ILE25 3.8 47.7 1.0 CG1 B:VAL36 3.8 46.1 1.0 HB2 A:LYS28 3.9 36.8 1.0 HB3 A:LYS28 3.9 36.8 1.0 CG2 A:ILE25 4.0 35.6 1.0 HB B:VAL36 4.1 53.3 1.0 CG2 B:VAL36 4.1 45.2 1.0 HG12 B:VAL36 4.2 55.4 1.0 CB B:VAL36 4.3 44.3 1.0 CC A:IYR29 4.3 41.4 1.0 CG A:IYR29 4.3 47.8 1.0 CB A:LYS28 4.3 30.6 1.0 HD2 A:LYS28 4.4 42.3 1.0 CD A:LYS28 4.4 35.2 1.0 O A:ILE25 4.4 31.8 1.0 CA A:ILE25 4.5 35.5 1.0 HG21 A:ILE25 4.5 42.8 1.0 HG13 B:VAL36 4.5 55.4 1.0 HG22 A:ILE25 4.5 42.8 1.0 CB A:ILE25 4.6 35.8 1.0 HG23 B:VAL36 4.6 54.3 1.0 CG1 A:ILE25 4.6 39.7 1.0 HG22 B:VAL36 4.8 54.3 1.0 CH A:IYR29 4.8 44.1 1.0 C A:ILE25 4.9 33.9 1.0 CZ A:ARG32 5.0 58.7 1.0

Iodine binding site 3 out of 38 in the Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 3 of Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma. within 5.0Å range: probe atom residue distance (Å) B Occ A:I79 b:32.9 occ:0.09 I1 A:TYI79 0.0 32.9 0.1 CE1 A:TYI79 2.0 35.9 1.0 HE21 A:GLN75 2.5 64.9 1.0 HD11 C:LEU61 2.8 67.1 1.0 HD11 A:LEU27 2.9 35.1 1.0 CD1 A:TYI79 2.9 35.7 1.0 HD1 A:TYI79 3.0 42.9 1.0 CZ A:TYI79 3.0 39.5 1.0 NE2 A:GLN75 3.3 54.0 1.0 OH A:TYI79 3.3 42.5 1.0 HG2 A:GLN75 3.4 54.4 1.0 HB3 A:GLN75 3.7 45.8 1.0 HE22 A:GLN75 3.7 64.9 1.0 CD1 C:LEU61 3.8 55.9 1.0 HD21 C:LEU61 3.8 63.2 1.0 CD1 A:LEU27 3.8 29.2 1.0 HD12 A:LEU27 4.0 35.1 1.0 CG A:GLN75 4.0 45.2 1.0 CD A:GLN75 4.1 50.6 1.0 HD12 C:LEU61 4.2 67.1 1.0 HD13 C:LEU61 4.2 67.1 1.0 HD21 A:LEU27 4.3 36.4 1.0 CG A:TYI79 4.3 36.5 1.0 CE2 A:TYI79 4.3 39.3 1.0 CB A:GLN75 4.4 38.1 1.0 HD13 A:LEU27 4.4 35.1 1.0 HG C:LEU61 4.4 65.0 1.0 CG C:LEU61 4.5 54.1 1.0 HB3 A:ASN23 4.5 61.6 1.0 CD2 C:LEU61 4.5 52.6 1.0 HG A:LEU27 4.6 34.5 1.0 HZ2 C:LYS37 4.7 51.1 1.0 CG A:LEU27 4.7 28.7 1.0 HZ1 C:LYS37 4.7 51.1 1.0 O A:GLN75 4.8 34.4 1.0 CD2 A:TYI79 4.8 38.8 1.0 HG3 A:GLN75 4.9 54.4 1.0 HD22 C:LEU61 4.9 63.2 1.0 HA A:GLN75 4.9 43.0 1.0 CD2 A:LEU27 5.0 30.3 1.0

Iodine binding site 4 out of 38 in the Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 4 of Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma. within 5.0Å range: probe atom residue distance (Å) B Occ A:I79 b:41.2 occ:0.42 I2 A:TYI79 0.0 41.2 0.4 CE2 A:TYI79 2.0 39.3 1.0 HG D:SER19 2.8 61.9 1.0 CZ A:TYI79 2.9 39.5 1.0 OH A:TYI79 3.0 42.5 1.0 CD2 A:TYI79 3.0 38.8 1.0 HD22 A:ASN23 3.1 72.0 1.0 HD2 A:TYI79 3.1 46.7 1.0 HE2 D:TYR18 3.5 59.6 1.0 OG D:SER19 3.5 51.5 1.0 HG12 A:ILE20 3.6 57.2 1.0 HD13 A:LEU82 3.7 90.9 1.0 ND2 A:ASN23 3.9 60.0 1.0 HD21 C:LEU61 3.9 63.2 1.0 HD22 C:LEU61 4.0 63.2 1.0 HD21 A:ASN23 4.1 72.0 1.0 CE2 D:TYR18 4.2 49.6 1.0 HA D:SER19 4.2 59.6 1.0 HG13 A:ILE20 4.2 57.2 1.0 HD2 D:TYR18 4.3 61.2 1.0 CE1 A:TYI79 4.3 35.9 1.0 HD11 A:LEU82 4.3 90.9 1.0 CD2 C:LEU61 4.3 52.6 1.0 CG A:TYI79 4.3 36.5 1.0 CD1 A:LEU82 4.3 75.7 1.0 HA A:ILE20 4.3 52.3 1.0 CG1 A:ILE20 4.4 47.6 1.0 HD12 A:LEU82 4.4 90.9 1.0 HD23 C:LEU61 4.4 63.2 1.0 HG3 D:GLU22 4.6 49.1 1.0 CD2 D:TYR18 4.6 50.9 1.0 CB D:SER19 4.6 51.8 1.0 HB2 A:ASN23 4.8 61.6 1.0 HB3 D:SER19 4.8 62.2 1.0 CD1 A:TYI79 4.8 35.7 1.0 CA D:SER19 4.9 49.6 1.0 O A:SER19 4.9 41.4 1.0 CG A:ASN23 5.0 57.3 1.0

Iodine binding site 5 out of 38 in the Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 5 of Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma. within 5.0Å range: probe atom residue distance (Å) B Occ B:I18 b:60.6 occ:0.23 I1 B:TYI18 0.0 60.6 0.2 CE1 B:TYI18 2.1 64.8 1.0 OH C:TYI79 2.9 79.6 1.0 CZ B:TYI18 3.0 66.2 1.0 CD1 B:TYI18 3.1 69.0 1.0 HG3 B:GLU22 3.1 58.3 1.0 HD1 B:TYI18 3.2 82.8 1.0 OH B:TYI18 3.2 66.0 1.0 HD12 A:LEU61 3.6 65.6 1.0 I1 C:TYI79 3.9 79.9 0.4 CG B:GLU22 4.1 48.5 1.0 CZ C:TYI79 4.1 78.9 1.0 HG2 B:GLU22 4.2 58.3 1.0 HD13 A:LEU61 4.2 65.6 1.0 H B:SER19 4.3 88.1 1.0 CD1 A:LEU61 4.3 54.6 1.0 CE2 B:TYI18 4.3 67.6 1.0 HA B:SER19 4.4 83.2 1.0 CG B:TYI18 4.5 73.5 1.0 CE1 C:TYI79 4.5 85.1 1.0 OE1 B:GLU22 4.7 46.3 1.0 HD11 A:LEU61 4.7 65.6 1.0 HB2 B:GLU22 4.8 57.0 1.0 HD12 A:LEU58 4.8 64.0 1.0 CD B:GLU22 4.8 46.2 1.0 HG1 A:THR41 4.9 60.0 1.0 CD2 B:TYI18 4.9 70.9 1.0 CB B:GLU22 5.0 47.4 1.0 HB3 A:LEU61 5.0 60.9 1.0

Iodine binding site 6 out of 38 in the Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 6 of Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma. within 5.0Å range: probe atom residue distance (Å) B Occ B:I18 b:67.2 occ:0.19 I2 B:TYI18 0.0 67.2 0.2 CE2 B:TYI18 2.0 67.6 1.0 HA A:THR41 2.5 63.0 1.0 HD2 B:TYI18 2.7 85.2 1.0 CD2 B:TYI18 2.7 70.9 1.0 HB3 A:GLU44 2.8 0.5 1.0 O A:ASN40 2.9 56.4 1.0 HB2 A:GLU44 3.1 0.5 1.0 CZ B:TYI18 3.1 66.2 1.0 C A:ASN40 3.1 52.6 1.0 CA A:THR41 3.3 52.5 1.0 H A:GLU44 3.3 95.2 1.0 CB A:GLU44 3.3 86.1 1.0 OH B:TYI18 3.4 66.0 1.0 N A:THR41 3.4 50.9 1.0 ND2 A:ASN40 3.5 58.4 1.0 CG A:ASN40 3.5 56.3 1.0 HB3 A:ASN40 3.6 62.2 1.0 HD22 A:ASN40 3.6 70.1 1.0 HD21 A:ASN40 3.7 70.1 1.0 OD1 A:ASN40 3.8 58.5 1.0 HG1 A:THR41 3.9 60.0 1.0 CB A:ASN40 3.9 51.7 1.0 H A:THR41 4.0 61.2 1.0 CG B:TYI18 4.0 73.5 1.0 CA A:ASN40 4.0 51.2 1.0 N A:GLU44 4.1 79.2 1.0 C A:THR41 4.2 53.8 1.0 O A:THR41 4.2 56.7 1.0 OG1 A:THR41 4.3 50.0 1.0 CA A:GLU44 4.3 84.6 1.0 HA A:ASN40 4.3 61.6 1.0 HD23 A:LEU58 4.3 63.7 1.0 CE1 B:TYI18 4.4 64.8 1.0 HG2 A:GLU44 4.4 0.4 1.0 CB A:THR41 4.4 49.2 1.0 CG A:GLU44 4.5 93.6 1.0 CD1 B:TYI18 4.6 69.0 1.0 HG A:LEU58 4.7 61.4 1.0 OE2 B:GLU21 4.7 66.1 1.0 OE2 B:GLU22 4.8 45.0 1.0 HG23 A:THR41 4.8 60.1 1.0 HB2 A:ASN40 4.9 62.2 1.0 HA B:TYI18 4.9 95.8 1.0 HA A:GLU44 4.9 0.6 1.0 H A:ARG43 4.9 81.6 1.0 HG2 B:GLU22 4.9 58.3 1.0 CD B:GLU22 5.0 46.2 1.0 H A:ILE45 5.0 91.7 1.0

Iodine binding site 7 out of 38 in the Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 7 of Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma. within 5.0Å range: probe atom residue distance (Å) B Occ B:I29 b:44.4 occ:0.66 I1 B:TYI29 0.0 44.4 0.7 CE1 B:TYI29 2.0 52.3 1.0 CZ B:TYI29 3.0 57.4 1.0 CD1 B:TYI29 3.0 51.9 1.0 HD1 B:TYI29 3.1 62.4 1.0 HD3 B:LYS28 3.1 54.3 1.0 HG21 A:VAL36 3.2 46.8 1.0 HG11 A:VAL36 3.2 49.6 1.0 HG12 B:ILE25 3.2 61.6 1.0 OH B:TYI29 3.2 61.4 1.0 HG23 B:ILE25 3.4 54.3 1.0 HZ2 B:LYS28 3.5 57.9 1.0 HH22 B:ARG32 3.7 79.2 1.0 HB2 B:LYS28 3.7 46.6 1.0 HB3 B:LYS28 3.8 46.6 1.0 HA B:ILE25 3.8 50.3 1.0 HH21 B:ARG32 3.9 79.2 1.0 NH2 B:ARG32 4.1 66.0 1.0 CD B:LYS28 4.1 45.2 1.0 CG1 A:VAL36 4.1 41.2 1.0 CG2 A:VAL36 4.1 38.9 1.0 CG1 B:ILE25 4.2 51.2 1.0 CB B:LYS28 4.2 38.8 1.0 CG2 B:ILE25 4.2 45.2 1.0 NZ B:LYS28 4.3 48.2 1.0 CE2 B:TYI29 4.3 58.3 1.0 CG B:TYI29 4.3 51.1 1.0 HZ3 B:LYS28 4.3 57.9 1.0 HG21 B:ILE25 4.4 54.3 1.0 HB A:VAL36 4.5 47.4 1.0 HG13 A:VAL36 4.5 49.6 1.0 HG22 A:VAL36 4.5 46.8 1.0 CB A:VAL36 4.5 39.4 1.0 HG13 B:ILE25 4.5 61.6 1.0 CA B:ILE25 4.5 41.9 1.0 CB B:ILE25 4.6 46.6 1.0 O B:ILE25 4.6 36.8 1.0 HD2 B:LYS28 4.6 54.3 1.0 CG B:LYS28 4.7 41.7 1.0 CE B:LYS28 4.7 47.6 1.0 HG23 A:VAL36 4.7 46.8 1.0 HG12 A:VAL36 4.8 49.6 1.0 CD2 B:TYI29 4.8 56.8 1.0 HD13 B:ILE25 4.8 66.6 1.0 HG2 B:LYS28 4.9 50.1 1.0 HE3 B:LYS28 4.9 57.2 1.0 HZ1 B:LYS28 5.0 57.9 1.0

Iodine binding site 8 out of 38 in the Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 8 of Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma. within 5.0Å range: probe atom residue distance (Å) B Occ B:I29 b:59.9 occ:0.16 I2 B:TYI29 0.0 59.9 0.2 CE2 B:TYI29 2.0 58.3 1.0 HB3 A:ARG32 2.6 55.4 1.0 HD2 A:ARG32 2.7 66.4 1.0 HH12 B:ARG32 2.9 78.6 1.0 CD2 B:TYI29 3.0 56.8 1.0 CZ B:TYI29 3.0 57.4 1.0 OH B:TYI29 3.0 61.4 1.0 HD2 B:TYI29 3.0 68.2 1.0 O A:HOH201 3.1 63.2 1.0 NH1 B:ARG32 3.3 65.4 1.0 HH11 B:ARG32 3.4 78.6 1.0 CB A:ARG32 3.4 46.1 1.0 CD A:ARG32 3.5 55.3 1.0 HE A:ARG32 3.6 68.8 1.0 HB2 A:ARG32 3.6 55.4 1.0 NE A:ARG32 3.8 57.3 1.0 CG A:ARG32 4.0 49.0 1.0 CG B:TYI29 4.3 51.1 1.0 CE1 B:TYI29 4.3 52.3 1.0 HD3 A:ARG32 4.3 66.4 1.0 HG2 A:ARG32 4.3 58.9 1.0 CZ B:ARG32 4.3 65.3 1.0 HH A:IYR29 4.4 53.0 1.0 HH22 B:ARG32 4.4 79.2 1.0 HG A:IYR29 4.5 57.5 1.0 C A:ARG32 4.6 41.6 1.0 CA A:ARG32 4.6 42.6 1.0 NH2 B:ARG32 4.7 66.0 1.0 HD2 B:ARG32 4.7 73.4 1.0 O A:ARG32 4.7 43.8 1.0 CD1 B:TYI29 4.8 51.9 1.0 CZ A:ARG32 4.8 58.7 1.0 CH A:IYR29 4.9 44.1 1.0 HG3 A:ARG32 4.9 58.9 1.0 HA A:IYR29 4.9 42.7 1.0 CG A:IYR29 4.9 47.8 1.0 N A:LYS33 5.0 37.6 1.0

Iodine binding site 9 out of 38 in the Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 9 of Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma. within 5.0Å range: probe atom residue distance (Å) B Occ B:I79 b:80.9 occ:0.44 I1 B:TYI79 0.0 80.9 0.4 CE1 B:TYI79 2.0 77.0 1.0 HE21 B:GLN75 2.7 71.4 1.0 CZ B:TYI79 3.0 78.3 1.0 CD1 B:TYI79 3.0 73.9 1.0 HG2 B:GLN75 3.1 71.6 1.0 HD1 B:TYI79 3.1 88.8 1.0 OH B:TYI79 3.2 81.4 1.0 HD22 D:LEU61 3.4 74.1 1.0 HD11 B:LEU27 3.4 43.0 1.0 NE2 B:GLN75 3.4 59.4 1.0 HD21 D:LEU61 3.7 74.1 1.0 HB3 B:GLN75 3.8 67.8 1.0 CG B:GLN75 3.9 59.6 1.0 HE22 B:GLN75 4.0 71.4 1.0 HD21 B:LEU27 4.0 40.4 1.0 CD2 D:LEU61 4.0 61.7 1.0 CD B:GLN75 4.1 59.2 1.0 CE2 B:TYI79 4.3 75.9 1.0 CG B:TYI79 4.3 71.9 1.0 OD1 B:ASN23 4.3 58.8 1.0 CD1 B:LEU27 4.4 35.8 1.0 CB B:GLN75 4.4 56.4 1.0 HD23 D:LEU61 4.5 74.1 1.0 HG3 B:GLN75 4.7 71.6 1.0 HD13 D:LEU61 4.7 74.3 1.0 HG B:LEU27 4.8 41.4 1.0 HD12 B:LEU27 4.8 43.0 1.0 HD13 B:LEU27 4.8 43.0 1.0 CD2 B:TYI79 4.8 72.8 1.0 CD2 B:LEU27 4.8 33.6 1.0 HB3 B:ASN23 4.9 65.2 1.0 CG B:LEU27 4.9 34.4 1.0

Iodine binding site 10 out of 38 in the Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 10 of Crystal Structure of Phyllogen, A Phyllody Inducing Effector Protein of Phytoplasma. within 5.0Å range: probe atom residue distance (Å) B Occ B:I79 b:76.3 occ:0.52 I2 B:TYI79 0.0 76.3 0.5 CE2 B:TYI79 2.0 75.9 1.0 CD2 B:TYI79 2.8 72.8 1.0 HD2 B:TYI79 2.8 87.5 1.0 CZ B:TYI79 3.0 78.3 1.0 OH B:TYI79 3.2 81.4 1.0 HD11 D:LEU61 3.5 74.3 1.0 HG12 B:ILE20 3.6 72.4 1.0 I1 C:TYI18 3.6 0.5 0.9 HD23 B:LEU82 4.0 93.8 1.0 CG B:TYI79 4.1 71.9 1.0 CE1 B:TYI79 4.3 77.0 1.0 CD1 D:LEU61 4.3 61.8 1.0 HD13 D:LEU61 4.3 74.3 1.0 HD21 B:LEU82 4.3 93.8 1.0 HA B:ILE20 4.3 66.3 1.0 CG1 B:ILE20 4.5 60.3 1.0 HB2 C:SER19 4.6 0.1 1.0 CD2 B:LEU82 4.6 78.1 1.0 HD12 D:LEU61 4.6 74.3 1.0 HD22 B:ASN23 4.6 77.0 1.0 CD1 B:TYI79 4.7 73.9 1.0 OG C:SER19 4.7 0.6 1.0 HD21 D:LEU61 4.7 74.1 1.0 HD1 C:TYI18 4.7 0.8 1.0 ND2 B:ASN23 4.8 64.1 1.0 HG13 B:ILE20 4.8 72.4 1.0 HB2 B:ASN23 4.8 65.2 1.0 HG23 B:ILE20 4.8 65.3 1.0 HA B:TYI79 4.9 82.2 1.0 HD21 B:ASN23 4.9 77.0 1.0

N.Iwabuchi, K.Maejima, Y.Kitazawa, H.Miyatake, M.Nishikawa, R.Tokuda, H.Koinuma, A.Miyazaki, T.Nijo, K.Oshima, Y.Yamaji, S.Namba. Crystal Structure of Phyllogen, A Phyllody-Inducing Effector Protein of Phytoplasma. Biochem.Biophys.Res.Commun. V. 513 952 2019.
ISSN: ESSN 1090-2104
PubMed: 31010685
DOI: 10.1016/J.BBRC.2019.04.060