Iodine in PDB 6mqo: Structure of Hiv-1 Ca G208R

The structure of Structure of Hiv-1 Ca G208R, PDB code: 6mqo was solved by S.S.Smaga, Y.Xiong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 3.20
Space group	P 6
Cell size a, b, c (Å), α, β, γ (°)	91.970, 91.970, 57.121, 90.00, 90.00, 120.00
R / Rfree (%)	20.6 / 27.1

The binding sites of Iodine atom in the Structure of Hiv-1 Ca G208R (pdb code 6mqo). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 2 binding sites of Iodine where determined in the Structure of Hiv-1 Ca G208R, PDB code: 6mqo:
Jump to Iodine binding site number: 1; 2;

Iodine binding site 1 out of 2 in the Structure of Hiv-1 Ca G208R


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Structure of Hiv-1 Ca G208R within 5.0Å range: probe atom residue distance (Å) B Occ A:I301 b:0.4 occ:1.00 NH2 A:ARG173 3.3 80.7 1.0 CG A:LYS170 3.9 75.5 1.0 CD A:ARG173 4.1 69.0 1.0 OE1 A:GLU35 4.2 90.3 1.0 CG A:PRO34 4.3 77.1 1.0 CZ A:ARG173 4.4 78.3 1.0 CB A:PRO34 4.4 75.3 1.0 CA A:LYS170 4.6 60.1 1.0 CB A:LYS170 4.7 67.6 1.0 CE A:LYS170 4.7 89.7 1.0 CD A:PRO34 4.7 77.8 1.0 NE A:ARG173 4.7 72.2 1.0 CD A:LYS170 4.8 83.3 1.0 OG A:SER33 4.9 88.1 1.0 CD A:GLU35 4.9 93.0 1.0 O A:LYS170 5.0 59.7 1.0 N A:GLU35 5.0 77.6 1.0

Iodine binding site 2 out of 2 in the Structure of Hiv-1 Ca G208R


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Structure of Hiv-1 Ca G208R within 5.0Å range: probe atom residue distance (Å) B Occ A:I302 b:0.6 occ:1.00 CG2 A:ILE91 4.0 0.1 1.0 CB A:GLN95 4.0 0.8 1.0 N A:ALA92 4.1 0.6 1.0 CA A:ILE91 4.2 0.4 1.0 CD1 A:ILE91 4.3 0.3 1.0 CG A:GLN95 4.4 0.2 1.0 CB A:ILE91 4.6 0.3 1.0 C A:ILE91 4.6 0.9 1.0 CB A:ALA92 4.8 0.1 1.0 O A:PRO90 5.0 0.4 1.0

S.S.Smaga, C.Xu, B.J.Summers, K.M.Digianantonio, J.R.Perilla, Y.Xiong. Mxb Restricts Hiv-1 By Targeting the Tri-Hexamer Interface of the Viral Capsid. Structure V. 27 1234 2019.
ISSN: ISSN 0969-2126
PubMed: 31155311
DOI: 10.1016/J.STR.2019.04.015