Iodine in PDB 6nqz: Flagellar Protein Fcpb From Leptospira Interrogans

The structure of Flagellar Protein Fcpb From Leptospira Interrogans, PDB code: 6nqz was solved by F.Trajtenberg, N.Larrieux, A.Buschiazzo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	37.01 / 2.58
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	60.735, 65.653, 134.396, 90.00, 90.00, 90.00
R / Rfree (%)	20.4 / 25

The binding sites of Iodine atom in the Flagellar Protein Fcpb From Leptospira Interrogans (pdb code 6nqz). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 6 binding sites of Iodine where determined in the Flagellar Protein Fcpb From Leptospira Interrogans, PDB code: 6nqz:
Jump to Iodine binding site number: 1; 2; 3; 4; 5; 6;

Iodine binding site 1 out of 6 in the Flagellar Protein Fcpb From Leptospira Interrogans


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Flagellar Protein Fcpb From Leptospira Interrogans within 5.0Å range: probe atom residue distance (Å) B Occ A:I301 b:56.5 occ:0.90 I3 A:I3C301 0.0 56.5 0.9 C6 A:I3C301 2.2 45.0 0.9 C5 A:I3C301 3.1 42.4 0.9 C1 A:I3C301 3.1 34.5 0.9 N13 A:I3C301 3.2 38.6 0.9 C7 A:I3C301 3.4 28.2 0.9 O9 A:I3C301 3.6 26.3 0.9 O8 A:I3C301 4.0 28.1 0.9 C4 A:I3C301 4.4 48.0 0.9 C2 A:I3C301 4.5 32.3 0.9 C3 A:I3C301 5.0 35.9 0.9

Iodine binding site 2 out of 6 in the Flagellar Protein Fcpb From Leptospira Interrogans


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Flagellar Protein Fcpb From Leptospira Interrogans within 5.0Å range: probe atom residue distance (Å) B Occ A:I301 b:68.0 occ:0.90 I2 A:I3C301 0.0 68.0 0.9 C4 A:I3C301 2.1 48.0 0.9 C3 A:I3C301 3.0 35.9 0.9 C5 A:I3C301 3.1 42.4 0.9 C10 A:I3C301 3.2 30.3 0.9 N13 A:I3C301 3.2 38.6 0.9 O11 A:I3C301 3.5 31.9 0.9 O12 A:I3C301 3.6 24.8 0.9 C2 A:I3C301 4.4 32.3 0.9 C6 A:I3C301 4.4 45.0 0.9 O A:HOH402 4.4 16.0 1.0 NZ A:LYS67 4.6 75.6 1.0 C1 A:I3C301 4.9 34.5 0.9

Iodine binding site 3 out of 6 in the Flagellar Protein Fcpb From Leptospira Interrogans


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 3 of Flagellar Protein Fcpb From Leptospira Interrogans within 5.0Å range: probe atom residue distance (Å) B Occ A:I301 b:28.7 occ:0.90 I1 A:I3C301 0.0 28.7 0.9 C2 A:I3C301 2.1 32.3 0.9 C3 A:I3C301 3.1 35.9 0.9 C1 A:I3C301 3.1 34.5 0.9 C10 A:I3C301 3.2 30.3 0.9 C7 A:I3C301 3.3 28.2 0.9 O A:THR74 3.4 29.4 1.0 O8 A:I3C301 3.4 28.1 0.9 O12 A:I3C301 3.7 24.8 0.9 O11 A:I3C301 3.7 31.9 0.9 O A:PRO75 3.7 28.7 1.0 O9 A:I3C301 3.9 26.3 0.9 CA A:ALA76 3.9 21.3 1.0 CD A:LYS67 4.0 29.4 1.0 C A:PRO75 4.0 27.6 1.0 C A:THR74 4.1 28.7 1.0 CB A:LYS67 4.1 13.6 1.0 CB A:THR74 4.1 25.6 1.0 N A:ALA76 4.1 22.7 1.0 N A:LYS67 4.2 13.3 1.0 CG2 A:THR74 4.2 17.9 1.0 CB A:ALA76 4.3 21.7 1.0 C4 A:I3C301 4.4 48.0 0.9 CG A:LYS67 4.4 24.7 1.0 C6 A:I3C301 4.4 45.0 0.9 CA A:THR74 4.7 21.5 1.0 CA A:LYS67 4.8 12.7 1.0 N A:PRO75 4.8 24.0 1.0 CA A:GLY66 4.9 12.8 1.0 CA A:PRO75 4.9 22.9 1.0 C5 A:I3C301 5.0 42.4 0.9 C A:GLY66 5.0 15.7 1.0

Iodine binding site 4 out of 6 in the Flagellar Protein Fcpb From Leptospira Interrogans


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 4 of Flagellar Protein Fcpb From Leptospira Interrogans within 5.0Å range: probe atom residue distance (Å) B Occ A:I302 b:33.3 occ:0.35 OD1 A:ASN135 3.3 36.7 1.0 O A:PRO133 3.7 22.9 1.0 C A:ARG134 3.7 22.4 1.0 N A:ASN135 3.8 19.6 1.0 C A:PRO133 3.9 23.6 1.0 CA A:ARG134 4.0 18.1 1.0 OG1 A:THR44 4.0 20.0 1.0 N A:ARG134 4.0 19.5 1.0 O A:ARG134 4.1 22.2 1.0 CG A:ASN135 4.1 38.9 1.0 CB A:PRO133 4.2 22.4 1.0 CB A:THR44 4.2 17.7 1.0 CA A:ASN135 4.3 18.4 1.0 CG2 A:THR44 4.6 11.2 1.0 OE1 A:GLN41 4.6 51.4 1.0 CA A:PRO133 4.7 20.9 1.0 CB A:ASN135 4.7 16.9 1.0 ND2 A:ASN135 5.0 32.5 1.0

Iodine binding site 5 out of 6 in the Flagellar Protein Fcpb From Leptospira Interrogans


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 5 of Flagellar Protein Fcpb From Leptospira Interrogans within 5.0Å range: probe atom residue distance (Å) B Occ A:I305 b:85.5 occ:1.00 O A:HOH407 3.2 32.4 1.0 O2 A:GOL304 3.6 41.9 1.0 C2 A:GOL304 3.8 44.9 1.0 O3 A:GOL304 3.8 54.4 1.0 CE A:LYS112 3.8 49.2 1.0 CE2 A:PHE228 3.9 21.4 1.0 CB A:GLN227 4.0 19.1 1.0 CZ A:PHE228 4.0 19.0 1.0 CD2 A:PHE228 4.0 18.4 1.0 CD2 A:LEU231 4.1 15.9 1.0 CG2 A:VAL91 4.1 28.5 1.0 C A:GLN227 4.2 22.1 1.0 CE1 A:PHE228 4.2 18.1 1.0 N A:PHE228 4.2 15.8 1.0 CG A:PHE228 4.2 16.2 1.0 CD1 A:PHE228 4.3 17.0 1.0 O A:GLN227 4.4 24.9 1.0 C3 A:GOL304 4.4 49.6 1.0 CA A:PHE228 4.4 14.6 1.0 NZ A:LYS112 4.6 61.7 1.0 CA A:GLN227 4.7 18.6 1.0 CB A:LEU231 4.7 12.8 1.0 CD A:LYS112 4.8 35.6 1.0 CB A:VAL91 4.9 29.4 1.0 CB A:PHE228 5.0 15.4 1.0

Iodine binding site 6 out of 6 in the Flagellar Protein Fcpb From Leptospira Interrogans


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 6 of Flagellar Protein Fcpb From Leptospira Interrogans within 5.0Å range: probe atom residue distance (Å) B Occ B:I301 b:65.9 occ:0.44 CG2 B:VAL62 4.2 23.0 1.0 CD1 B:TYR92 4.3 26.5 1.0 CZ B:PHE94 4.4 57.8 1.0 CG B:TYR92 4.5 24.5 1.0 CA B:ARG60 4.6 26.6 1.0 CE1 B:TYR92 4.6 25.9 1.0 CB B:TYR92 4.8 24.2 1.0 C B:ARG60 4.9 30.8 1.0 CD2 B:TYR92 4.9 24.5 1.0 CE1 B:PHE94 4.9 58.5 1.0 N B:THR61 5.0 26.2 1.0

K.Gibson, F.Trajtenberg, M.Brady, F.San Martin, A.Mechaly, E.Wunder, M.Picardeau, A.Ko, A.Buschiazzo, C.Sindelar. An Asymmetric Sheath Templates Flagellar Supercoiling to Drive Motility in the Leptospira Spirochete To Be Published.