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Iodine in PDB 7fgr: The Cross-Reaction Complex Structure with Vqifnk Peptide and the Tau Antibody'S Fab Domain.

Protein crystallography data

The structure of The Cross-Reaction Complex Structure with Vqifnk Peptide and the Tau Antibody'S Fab Domain., PDB code: 7fgr was solved by T.Tsuchida, T.Tsuchiya, K.Miyamoto, Y.In, K.Minoura, T.Taniguchi, T.Ishida, K.Tomoo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.67 / 2.20
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 179.05, 70.14, 41.26, 90, 93.15, 90
R / Rfree (%) 20 / 27.2

Other elements in 7fgr:

The structure of The Cross-Reaction Complex Structure with Vqifnk Peptide and the Tau Antibody'S Fab Domain. also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Iodine Binding Sites:

The binding sites of Iodine atom in the The Cross-Reaction Complex Structure with Vqifnk Peptide and the Tau Antibody'S Fab Domain. (pdb code 7fgr). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the The Cross-Reaction Complex Structure with Vqifnk Peptide and the Tau Antibody'S Fab Domain., PDB code: 7fgr:

Iodine binding site 1 out of 1 in 7fgr

Go back to Iodine Binding Sites List in 7fgr
Iodine binding site 1 out of 1 in the The Cross-Reaction Complex Structure with Vqifnk Peptide and the Tau Antibody'S Fab Domain.


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of The Cross-Reaction Complex Structure with Vqifnk Peptide and the Tau Antibody'S Fab Domain. within 5.0Å range:
probe atom residue distance (Å) B Occ
H:I308

b:42.4
occ:1.00
NH1 H:ARG40 3.6 36.4 1.0
N H:TRP47 3.7 34.7 1.0
N L:PHE106 3.8 40.2 1.0
CA H:GLU46 4.1 29.3 1.0
CA L:VAL105 4.2 43.9 1.0
CD2 L:PHE106 4.3 35.9 1.0
O L:TYR104 4.3 44.7 1.0
O H:LEU45 4.3 29.1 1.0
O L:HOH426 4.4 33.5 1.0
C H:GLU46 4.4 30.4 1.0
CB H:TRP47 4.4 40.2 1.0
ND2 H:ASN61 4.4 42.5 1.0
O L:PHE106 4.5 41.0 1.0
C L:VAL105 4.6 42.4 1.0
CB L:PHE106 4.6 39.4 1.0
CA H:TRP47 4.7 35.3 1.0
O H:HOH401 4.7 39.6 1.0
CG H:GLU46 4.7 30.5 1.0
CA L:PHE106 4.8 37.5 1.0
CZ H:ARG40 4.8 39.4 1.0
CB H:GLU46 4.8 29.6 1.0
CG L:PHE106 4.9 36.0 1.0
O H:TRP47 4.9 35.3 1.0
CB L:VAL105 4.9 50.0 1.0
CG2 L:VAL105 5.0 52.0 1.0

Reference:

T.Tsuchida, T.Tsuchiya, K.Miyamoto, Y.In, K.Minoura, T.Taniguchi, T.Ishida, K.Tomoo. The Cross-Reaction Complex Structure with Vqifnk Peptide and the Tau Antibody'S Fab Domain. To Be Published.
Page generated: Mon Aug 12 01:10:16 2024

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