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Iodine in PDB 7m0v: Crystal Structure of the Braf:MEK1 Kinases in Complex with Amppnp and Cobimetinib

Enzymatic activity of Crystal Structure of the Braf:MEK1 Kinases in Complex with Amppnp and Cobimetinib

All present enzymatic activity of Crystal Structure of the Braf:MEK1 Kinases in Complex with Amppnp and Cobimetinib:
2.7.11.1; 2.7.12.2;

Protein crystallography data

The structure of Crystal Structure of the Braf:MEK1 Kinases in Complex with Amppnp and Cobimetinib, PDB code: 7m0v was solved by K.Li, G.Gonzalez Del-Pino, B.H.Ha, E.Park, M.J.Eck, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.30 / 3.16
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 116.144, 116.144, 129.886, 90, 90, 120
R / Rfree (%) 18.6 / 23.4

Other elements in 7m0v:

The structure of Crystal Structure of the Braf:MEK1 Kinases in Complex with Amppnp and Cobimetinib also contains other interesting chemical elements:

Fluorine (F) 3 atoms
Magnesium (Mg) 2 atoms

Iodine Binding Sites:

The binding sites of Iodine atom in the Crystal Structure of the Braf:MEK1 Kinases in Complex with Amppnp and Cobimetinib (pdb code 7m0v). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the Crystal Structure of the Braf:MEK1 Kinases in Complex with Amppnp and Cobimetinib, PDB code: 7m0v:

Iodine binding site 1 out of 1 in 7m0v

Go back to Iodine Binding Sites List in 7m0v
Iodine binding site 1 out of 1 in the Crystal Structure of the Braf:MEK1 Kinases in Complex with Amppnp and Cobimetinib


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Crystal Structure of the Braf:MEK1 Kinases in Complex with Amppnp and Cobimetinib within 5.0Å range:
probe atom residue distance (Å) B Occ
B:I803

b:102.4
occ:1.00
 I8 B:EUI803 0.0 102.4 1.0
C2 B:EUI803 2.2 88.7 1.0
C3 B:EUI803 3.1 95.1 1.0
C1 B:EUI803 3.1 91.6 1.0
O B:VAL127 3.7 85.5 1.0
CE1 B:PHE209 3.9 90.3 1.0
CB B:VAL127 4.1 79.9 1.0
C B:VAL127 4.3 82.9 1.0
CZ B:PHE209 4.3 93.7 1.0
O B:GLY128 4.4 88.0 1.0
C4 B:EUI803 4.4 94.3 1.0
C6 B:EUI803 4.5 93.3 1.0
CG1 B:VAL127 4.5 82.4 1.0
CA B:VAL127 4.6 81.9 1.0
CA B:CYS207 4.7 86.0 0.6
CB B:CYS207 4.7 83.2 0.6
CB B:PHE129 4.7 84.3 1.0
CA B:CYS207 4.8 78.6 0.4
SG B:CYS207 4.8 83.0 0.4
C B:GLY128 4.8 85.6 1.0
CD1 B:LEU118 4.8 79.4 1.0
N B:VAL127 4.9 80.5 1.0
CD1 B:PHE209 4.9 92.9 1.0
CB B:MET143 4.9 84.9 1.0
O B:LEU206 4.9 82.0 1.0
CG2 B:ILE126 4.9 88.4 1.0
CD1 B:PHE129 5.0 82.4 1.0

Reference:

K.Li, G.Gonzalez Del-Pino, B.H.Ha, E.Park, M.J.Eck. Crystal Structure of the Braf:MEK1 Kinases in Complex with Amppnp and Cobimetinib To Be Published.
Page generated: Mon Aug 12 01:44:33 2024

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