Iodine in PDB 7sdz: [Iu:HG2+:S] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice

The structure of [Iu:HG2+:S] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7sdz was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.72 / 4.51
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	105.839, 105.839, 93.477, 90, 90, 120
R / Rfree (%)	16.6 / 19.7

The structure of [Iu:HG2+:S] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice also contains other interesting chemical elements:

Mercury

(Hg)

1 atom

The binding sites of Iodine atom in the [Iu:HG2+:S] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice (pdb code 7sdz). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the [Iu:HG2+:S] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7sdz:

Iodine binding site 1 out of 1 in the [Iu:HG2+:S] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of [Iu:HG2+:S] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice within 5.0Å range: probe atom residue distance (Å) B Occ A:I12 b:307.1 occ:1.00 I5 A:5IU12 0.0 307.1 1.0 C5 A:5IU12 2.1 307.3 1.0 C6 A:5IU12 3.1 303.2 1.0 C4 A:5IU12 3.1 312.7 1.0 O4 A:5IU12 3.3 317.4 1.0 C2 A:DT11 3.7 258.2 1.0 N3 A:DT11 3.8 264.3 1.0 N1 A:DT11 3.8 254.9 1.0 C4 A:DT11 4.0 265.9 1.0 C6 A:DT11 4.0 257.7 1.0 C2' A:DT11 4.1 248.2 1.0 C5 A:DT11 4.1 262.9 1.0 O2 A:DT11 4.1 255.7 1.0 N3 A:5IU12 4.3 313.7 1.0 N1 A:5IU12 4.3 304.1 1.0 O4 A:DT13 4.4 247.3 1.0 C7 A:DT13 4.5 235.3 1.0 C1' A:DT11 4.5 250.0 1.0 OP1 A:5IU12 4.6 295.6 1.0 O4 A:DT11 4.6 271.2 1.0 C2 A:5IU12 4.8 309.4 1.0

S.Vecchioni, B.Lu, R.Sha, Y.P.Ohayon, J.Yoder, K.Woloszyn, W.Bernfeld, W.Hendrickson, L.Rothschild, C.Mao, S.Wind, N.C.Seeman. Metal-Mediated Dna Nanotechnology in 3D: Reengineering the Semantomorphic Alphabet To Be Published.