Iodine in PDB 7se0: [Iu:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice

The structure of [Iu:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7se0 was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.73 / 3.93
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	105.606, 105.606, 93.758, 90, 90, 120
R / Rfree (%)	20.7 / 22.9

The structure of [Iu:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice also contains other interesting chemical elements:

Mercury

(Hg)

1 atom

The binding sites of Iodine atom in the [Iu:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice (pdb code 7se0). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the [Iu:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7se0:

Iodine binding site 1 out of 1 in the [Iu:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of [Iu:HG2+:T] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice within 5.0Å range: probe atom residue distance (Å) B Occ A:I12 b:278.3 occ:1.00 I5 A:5IU12 0.0 278.3 1.0 C5 A:5IU12 2.1 277.6 1.0 C6 A:5IU12 3.1 273.8 1.0 C4 A:5IU12 3.1 281.0 1.0 O4 A:5IU12 3.3 284.4 1.0 N1 A:DT11 3.9 247.7 1.0 C2' A:DT11 3.9 238.8 1.0 C6 A:DT11 3.9 249.4 1.0 C2 A:DT11 4.0 250.7 1.0 O4 A:DT13 4.0 242.3 1.0 N3 A:DT11 4.1 255.6 1.0 C5 A:DT11 4.2 254.5 1.0 C4 A:DT11 4.3 257.4 1.0 N1 A:5IU12 4.3 272.9 1.0 N3 A:5IU12 4.3 282.1 1.0 C7 A:DT13 4.4 233.9 1.0 C1' A:DT11 4.4 242.2 1.0 O2 A:DT11 4.5 249.7 1.0 OP1 A:5IU12 4.6 265.1 1.0 C4 A:DT13 4.7 240.9 1.0 C2 A:5IU12 4.8 277.2 1.0 C5 A:DT13 4.9 236.6 1.0 O4 A:DT11 4.9 261.0 1.0 C7 A:DT11 5.0 257.4 1.0 OP2 A:5IU12 5.0 267.8 1.0

S.Vecchioni, B.Lu, R.Sha, Y.P.Ohayon, J.Yoder, K.Woloszyn, W.Bernfeld, W.Hendrickson, L.Rothschild, C.Mao, S.Wind, N.C.Seeman. Metal-Mediated Dna Nanotechnology in 3D: Reengineering the Semantomorphic Alphabet To Be Published.