Iodine in PDB 7se4: [Iu:HG2+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice

The structure of [Iu:HG2+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7se4 was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.58 / 4.65
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	106.204, 106.204, 92.31, 90, 90, 120
R / Rfree (%)	18.8 / 20.1

The structure of [Iu:HG2+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice also contains other interesting chemical elements:

Mercury

(Hg)

1 atom

The binding sites of Iodine atom in the [Iu:HG2+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice (pdb code 7se4). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the [Iu:HG2+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7se4:

Iodine binding site 1 out of 1 in the [Iu:HG2+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of [Iu:HG2+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice within 5.0Å range: probe atom residue distance (Å) B Occ A:I12 b:408.3 occ:1.00 I5 A:5IU12 0.0 408.3 1.0 C5 A:5IU12 1.9 401.1 1.0 C6 A:5IU12 2.8 383.6 1.0 C4 A:5IU12 2.9 409.0 1.0 O4 A:5IU12 3.1 417.6 1.0 C2' A:DT11 3.3 403.4 1.0 N1 A:DT11 3.4 435.5 1.0 C6 A:DT11 3.5 441.6 1.0 C2 A:DT11 3.6 418.5 1.0 C5 A:DT11 3.8 440.9 1.0 C1' A:DT11 3.9 412.4 1.0 N3 A:DT11 3.9 412.2 1.0 C4 A:DT11 4.1 425.9 1.0 OP1 A:5IU12 4.1 389.6 1.0 N3 A:5IU12 4.1 401.5 1.0 N1 A:5IU12 4.2 375.5 1.0 O2 A:DT11 4.2 440.8 1.0 C7 A:DT13 4.6 391.1 1.0 C7 A:DT11 4.7 449.9 1.0 C2 A:5IU12 4.7 385.9 1.0 C3' A:DT11 4.8 385.8 1.0 O4 A:DT13 4.8 405.8 1.0 OP2 A:5IU12 4.8 423.4 1.0 O4 A:DT11 4.9 423.9 1.0 P A:5IU12 4.9 385.7 1.0

S.Vecchioni, B.Lu, R.Sha, Y.P.Ohayon, J.Yoder, K.Woloszyn, W.Bernfeld, W.Hendrickson, L.Rothschild, C.Mao, S.Wind, N.C.Seeman. Metal-Mediated Dna Nanotechnology in 3D: Reengineering the Semantomorphic Alphabet To Be Published.