Iodine in PDB 7t88: Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli

Enzymatic activity of Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli

All present enzymatic activity of Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli:
2.3.1.8;

Protein crystallography data

The structure of Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli, PDB code: 7t88 was solved by Y.Kim, A.Dementiev, L.Welk, M.Endres, A.Joachimiak, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.26 / 2.10
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 72.875, 72.875, 193.248, 90, 90, 90
R / Rfree (%) 20 / 23.1

Other elements in 7t88:

The structure of Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli also contains other interesting chemical elements:

Sodium (Na) 1 atom
Potassium (K) 1 atom
Chlorine (Cl) 1 atom

Iodine Binding Sites:

The binding sites of Iodine atom in the Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli (pdb code 7t88). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 2 binding sites of Iodine where determined in the Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli, PDB code: 7t88:
Jump to Iodine binding site number: 1; 2;

Iodine binding site 1 out of 2 in 7t88

Go back to Iodine Binding Sites List in 7t88
Iodine binding site 1 out of 2 in the Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:I809

b:91.1
occ:0.35
NA A:NA811 3.0 73.3 1.0
OH A:TYR627 3.2 46.0 1.0
CE2 A:TYR627 3.9 43.1 1.0
CZ A:TYR627 4.0 45.7 1.0
CE2 A:TYR550 4.3 62.6 1.0
OH A:TYR552 4.6 46.3 1.0
CD2 A:TYR550 4.7 56.2 1.0
CD2 A:LEU545 4.9 65.2 1.0
CG1 A:VAL631 4.9 55.8 1.0

Iodine binding site 2 out of 2 in 7t88

Go back to Iodine Binding Sites List in 7t88
Iodine binding site 2 out of 2 in the Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Crystal Structure of the C-Terminal Domain of the Phosphate Acetyltransferase From Escherichia Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:I810

b:72.6
occ:0.28
N A:GLU547 3.4 67.5 1.0
NE2 A:GLN548 3.6 64.3 1.0
CG A:GLN548 3.7 67.1 1.0
CB A:LEU545 3.8 57.3 1.0
CD A:PRO546 3.9 59.5 1.0
CB A:GLU547 3.9 71.9 1.0
N A:PRO546 4.0 59.6 1.0
CA A:GLU547 4.0 69.9 1.0
CD A:GLN548 4.1 67.3 1.0
N A:GLN548 4.1 65.0 1.0
CD2 A:LEU545 4.1 65.2 1.0
C A:GLU547 4.3 71.4 1.0
C A:PRO546 4.4 67.3 1.0
CB A:PRO546 4.4 64.2 1.0
CA A:PRO546 4.5 63.7 1.0
C A:LEU545 4.5 57.8 1.0
CG A:PRO546 4.5 67.8 1.0
CG A:LEU545 4.6 60.1 1.0
CG A:GLU547 4.6 74.6 1.0
CB A:GLN548 4.7 61.5 1.0
CA A:LEU545 4.8 54.0 1.0

Reference:

Y.Kim, A.Dementiev, L.Welk, M.Endres, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of C From Escherichia Coli To Be Published.
Page generated: Fri Dec 24 06:15:05 2021

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