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Iodine in PDB 8sh3: Pendrin in Complex with Iodide

Iodine Binding Sites:

The binding sites of Iodine atom in the Pendrin in Complex with Iodide (pdb code 8sh3). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 4 binding sites of Iodine where determined in the Pendrin in Complex with Iodide, PDB code: 8sh3:
Jump to Iodine binding site number: 1; 2; 3; 4;

Iodine binding site 1 out of 4 in 8sh3

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Iodine binding site 1 out of 4 in the Pendrin in Complex with Iodide


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Pendrin in Complex with Iodide within 5.0Å range:
probe atom residue distance (Å) B Occ
C:I803

b:117.5
occ:1.00
OG C:SER408 3.4 55.9 1.0
N C:SER408 3.9 55.9 1.0
CB C:SER408 3.9 55.9 1.0
CE1 C:PHE141 4.0 45.4 1.0
N C:LEU407 4.1 55.8 1.0
CB C:ALA406 4.3 51.8 1.0
CD1 C:PHE141 4.3 45.4 1.0
OH C:TYR105 4.5 47.9 1.0
CA C:SER408 4.5 55.9 1.0
C C:ALA406 4.8 51.8 1.0
CA C:ALA406 4.8 51.8 1.0
I C:IOD804 4.8 110.8 1.0
CB C:LEU407 4.8 55.8 1.0
CA C:LEU407 4.8 55.8 1.0
C C:LEU407 4.8 55.8 1.0
ND2 C:ASN457 5.0 58.9 1.0
NE2 C:GLN101 5.0 52.1 1.0
CD C:PRO142 5.0 44.5 1.0
CZ C:PHE141 5.0 45.4 1.0

Iodine binding site 2 out of 4 in 8sh3

Go back to Iodine Binding Sites List in 8sh3
Iodine binding site 2 out of 4 in the Pendrin in Complex with Iodide


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Pendrin in Complex with Iodide within 5.0Å range:
probe atom residue distance (Å) B Occ
C:I804

b:110.8
occ:1.00
OH C:TYR105 2.6 47.9 1.0
ND2 C:ASN457 3.4 58.9 1.0
CG C:ASN457 3.4 58.9 1.0
CZ C:TYR105 3.5 47.9 1.0
CB C:ASN457 3.5 58.9 1.0
CE1 C:TYR105 3.6 47.9 1.0
OD1 C:ASN457 4.1 58.9 1.0
NE2 C:GLN101 4.2 52.1 1.0
CA C:VAL454 4.4 54.5 1.0
O C:VAL453 4.6 56.8 1.0
CG C:GLN101 4.6 52.1 1.0
CG1 C:VAL453 4.7 56.8 1.0
CG2 C:VAL454 4.7 54.5 1.0
CD C:GLN101 4.8 52.1 1.0
I C:IOD803 4.8 117.5 1.0
CE2 C:TYR105 4.8 47.9 1.0
OG C:SER408 4.9 55.9 1.0
CG C:PRO142 4.9 44.5 1.0
N C:VAL454 4.9 54.5 1.0
CD1 C:TYR105 4.9 47.9 1.0
CB C:VAL454 5.0 54.5 1.0
CA C:ASN457 5.0 58.9 1.0
C C:VAL453 5.0 56.8 1.0

Iodine binding site 3 out of 4 in 8sh3

Go back to Iodine Binding Sites List in 8sh3
Iodine binding site 3 out of 4 in the Pendrin in Complex with Iodide


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 3 of Pendrin in Complex with Iodide within 5.0Å range:
probe atom residue distance (Å) B Occ
D:I803

b:121.5
occ:1.00
OG D:SER408 3.4 57.9 1.0
N D:SER408 3.9 57.9 1.0
CB D:SER408 3.9 57.9 1.0
CE1 D:PHE141 4.0 45.9 1.0
N D:LEU407 4.1 57.8 1.0
CB D:ALA406 4.3 53.4 1.0
CD1 D:PHE141 4.3 45.9 1.0
OH D:TYR105 4.5 48.2 1.0
CA D:SER408 4.5 57.9 1.0
C D:ALA406 4.8 53.4 1.0
CA D:ALA406 4.8 53.4 1.0
CB D:LEU407 4.8 57.8 1.0
CA D:LEU407 4.8 57.8 1.0
C D:LEU407 4.8 57.8 1.0
I D:IOD804 4.8 110.8 1.0
CD D:PRO142 4.9 45.1 1.0
CZ D:PHE141 5.0 45.9 1.0

Iodine binding site 4 out of 4 in 8sh3

Go back to Iodine Binding Sites List in 8sh3
Iodine binding site 4 out of 4 in the Pendrin in Complex with Iodide


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 4 of Pendrin in Complex with Iodide within 5.0Å range:
probe atom residue distance (Å) B Occ
D:I804

b:110.8
occ:1.00
OH D:TYR105 2.6 48.2 1.0
ND2 D:ASN457 3.3 60.2 1.0
CG D:ASN457 3.4 60.2 1.0
CB D:ASN457 3.4 60.2 1.0
CZ D:TYR105 3.6 48.2 1.0
CE1 D:TYR105 3.7 48.2 1.0
OD1 D:ASN457 4.1 60.2 1.0
CA D:VAL454 4.4 55.1 1.0
OE1 D:GLN101 4.5 52.6 1.0
O D:VAL453 4.5 57.8 1.0
CD D:GLN101 4.6 52.6 1.0
CG1 D:VAL453 4.7 57.8 1.0
CG2 D:VAL454 4.8 55.1 1.0
I D:IOD803 4.8 121.5 1.0
OG D:SER408 4.8 57.9 1.0
CG D:GLN101 4.9 52.6 1.0
CE2 D:TYR105 4.9 48.2 1.0
N D:VAL454 4.9 55.1 1.0
CA D:ASN457 4.9 60.2 1.0
C D:VAL453 4.9 57.8 1.0

Reference:

L.Wang, A.Hoang, M.Zhou. Pendrin in Complex with Chloride To Be Published.
Page generated: Mon Aug 12 03:04:30 2024

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