Atomistry » Iodine » PDB 8e7f-8sh3 » 8sh3
Atomistry »
  Iodine »
    PDB 8e7f-8sh3 »
      8sh3 »

Iodine in PDB 8sh3: Pendrin in Complex with Iodide

Iodine Binding Sites:

The binding sites of Iodine atom in the Pendrin in Complex with Iodide (pdb code 8sh3). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 4 binding sites of Iodine where determined in the Pendrin in Complex with Iodide, PDB code: 8sh3:
Jump to Iodine binding site number: 1; 2; 3; 4;

Iodine binding site 1 out of 4 in 8sh3

Go back to Iodine Binding Sites List in 8sh3
Iodine binding site 1 out of 4 in the Pendrin in Complex with Iodide


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Pendrin in Complex with Iodide within 5.0Å range:
probe atom residue distance (Å) B Occ
C:I803

b:117.5
occ:1.00
OG C:SER408 3.4 55.9 1.0
N C:SER408 3.9 55.9 1.0
CB C:SER408 3.9 55.9 1.0
CE1 C:PHE141 4.0 45.4 1.0
N C:LEU407 4.1 55.8 1.0
CB C:ALA406 4.3 51.8 1.0
CD1 C:PHE141 4.3 45.4 1.0
OH C:TYR105 4.5 47.9 1.0
CA C:SER408 4.5 55.9 1.0
C C:ALA406 4.8 51.8 1.0
CA C:ALA406 4.8 51.8 1.0
I C:IOD804 4.8 110.8 1.0
CB C:LEU407 4.8 55.8 1.0
CA C:LEU407 4.8 55.8 1.0
C C:LEU407 4.8 55.8 1.0
ND2 C:ASN457 5.0 58.9 1.0
NE2 C:GLN101 5.0 52.1 1.0
CD C:PRO142 5.0 44.5 1.0
CZ C:PHE141 5.0 45.4 1.0

Iodine binding site 2 out of 4 in 8sh3

Go back to Iodine Binding Sites List in 8sh3
Iodine binding site 2 out of 4 in the Pendrin in Complex with Iodide


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Pendrin in Complex with Iodide within 5.0Å range:
probe atom residue distance (Å) B Occ
C:I804

b:110.8
occ:1.00
OH C:TYR105 2.6 47.9 1.0
ND2 C:ASN457 3.4 58.9 1.0
CG C:ASN457 3.4 58.9 1.0
CZ C:TYR105 3.5 47.9 1.0
CB C:ASN457 3.5 58.9 1.0
CE1 C:TYR105 3.6 47.9 1.0
OD1 C:ASN457 4.1 58.9 1.0
NE2 C:GLN101 4.2 52.1 1.0
CA C:VAL454 4.4 54.5 1.0
O C:VAL453 4.6 56.8 1.0
CG C:GLN101 4.6 52.1 1.0
CG1 C:VAL453 4.7 56.8 1.0
CG2 C:VAL454 4.7 54.5 1.0
CD C:GLN101 4.8 52.1 1.0
I C:IOD803 4.8 117.5 1.0
CE2 C:TYR105 4.8 47.9 1.0
OG C:SER408 4.9 55.9 1.0
CG C:PRO142 4.9 44.5 1.0
N C:VAL454 4.9 54.5 1.0
CD1 C:TYR105 4.9 47.9 1.0
CB C:VAL454 5.0 54.5 1.0
CA C:ASN457 5.0 58.9 1.0
C C:VAL453 5.0 56.8 1.0

Iodine binding site 3 out of 4 in 8sh3

Go back to Iodine Binding Sites List in 8sh3
Iodine binding site 3 out of 4 in the Pendrin in Complex with Iodide


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 3 of Pendrin in Complex with Iodide within 5.0Å range:
probe atom residue distance (Å) B Occ
D:I803

b:121.5
occ:1.00
OG D:SER408 3.4 57.9 1.0
N D:SER408 3.9 57.9 1.0
CB D:SER408 3.9 57.9 1.0
CE1 D:PHE141 4.0 45.9 1.0
N D:LEU407 4.1 57.8 1.0
CB D:ALA406 4.3 53.4 1.0
CD1 D:PHE141 4.3 45.9 1.0
OH D:TYR105 4.5 48.2 1.0
CA D:SER408 4.5 57.9 1.0
C D:ALA406 4.8 53.4 1.0
CA D:ALA406 4.8 53.4 1.0
CB D:LEU407 4.8 57.8 1.0
CA D:LEU407 4.8 57.8 1.0
C D:LEU407 4.8 57.8 1.0
I D:IOD804 4.8 110.8 1.0
CD D:PRO142 4.9 45.1 1.0
CZ D:PHE141 5.0 45.9 1.0

Iodine binding site 4 out of 4 in 8sh3

Go back to Iodine Binding Sites List in 8sh3
Iodine binding site 4 out of 4 in the Pendrin in Complex with Iodide


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 4 of Pendrin in Complex with Iodide within 5.0Å range:
probe atom residue distance (Å) B Occ
D:I804

b:110.8
occ:1.00
OH D:TYR105 2.6 48.2 1.0
ND2 D:ASN457 3.3 60.2 1.0
CG D:ASN457 3.4 60.2 1.0
CB D:ASN457 3.4 60.2 1.0
CZ D:TYR105 3.6 48.2 1.0
CE1 D:TYR105 3.7 48.2 1.0
OD1 D:ASN457 4.1 60.2 1.0
CA D:VAL454 4.4 55.1 1.0
OE1 D:GLN101 4.5 52.6 1.0
O D:VAL453 4.5 57.8 1.0
CD D:GLN101 4.6 52.6 1.0
CG1 D:VAL453 4.7 57.8 1.0
CG2 D:VAL454 4.8 55.1 1.0
I D:IOD803 4.8 121.5 1.0
OG D:SER408 4.8 57.9 1.0
CG D:GLN101 4.9 52.6 1.0
CE2 D:TYR105 4.9 48.2 1.0
N D:VAL454 4.9 55.1 1.0
CA D:ASN457 4.9 60.2 1.0
C D:VAL453 4.9 57.8 1.0

Reference:

L.Wang, A.Hoang, M.Zhou. Pendrin in Complex with Chloride To Be Published.
Page generated: Mon Aug 12 03:04:30 2024

Last articles

Ca in 5PB5
Ca in 5PB4
Ca in 5PB3
Ca in 5PB2
Ca in 5PB0
Ca in 5PB1
Ca in 5PAY
Ca in 5PAX
Ca in 5PAW
Ca in 5PAV
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy