Iodine in PDB 8ua2: Crystal Structure of Infected Cell Protein 0 (ICP0) From Herpes Simplex Virus 1 (Proteolyzed Fragment)

The structure of Crystal Structure of Infected Cell Protein 0 (ICP0) From Herpes Simplex Virus 1 (Proteolyzed Fragment), PDB code: 8ua2 was solved by S.Lovell, M.Kashipathy, K.P.Battaile, A.Cooper, D.Davido, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.73 / 2.65
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	95.909, 95.909, 74.526, 90, 90, 90
R / Rfree (%)	21.8 / 28.8

The binding sites of Iodine atom in the Crystal Structure of Infected Cell Protein 0 (ICP0) From Herpes Simplex Virus 1 (Proteolyzed Fragment) (pdb code 8ua2). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 2 binding sites of Iodine where determined in the Crystal Structure of Infected Cell Protein 0 (ICP0) From Herpes Simplex Virus 1 (Proteolyzed Fragment), PDB code: 8ua2:
Jump to Iodine binding site number: 1; 2;

Iodine binding site 1 out of 2 in the Crystal Structure of Infected Cell Protein 0 (ICP0) From Herpes Simplex Virus 1 (Proteolyzed Fragment)


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Crystal Structure of Infected Cell Protein 0 (ICP0) From Herpes Simplex Virus 1 (Proteolyzed Fragment) within 5.0Å range: probe atom residue distance (Å) B Occ A:I801 b:114.6 occ:1.00 NH1 A:ARG694 3.9 68.6 1.0 CA A:ALA698 3.9 72.0 1.0 N A:ALA698 4.1 76.6 1.0 CB A:ALA698 4.1 71.0 1.0 CD A:ARG694 4.3 70.2 1.0 C A:ALA697 4.3 60.5 1.0 CB A:ALA697 4.3 61.9 1.0 CZ A:ARG694 4.5 63.6 1.0 O A:ALA697 4.6 65.5 1.0 NE A:ARG694 4.7 68.7 1.0 O A:ARG694 4.8 67.3 1.0 CB B:ARG642 4.8 55.2 1.0

Iodine binding site 2 out of 2 in the Crystal Structure of Infected Cell Protein 0 (ICP0) From Herpes Simplex Virus 1 (Proteolyzed Fragment)


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Crystal Structure of Infected Cell Protein 0 (ICP0) From Herpes Simplex Virus 1 (Proteolyzed Fragment) within 5.0Å range: probe atom residue distance (Å) B Occ B:I801 b:98.2 occ:1.00 NH1 B:ARG705 3.6 75.8 1.0 CA B:TRP702 3.9 75.1 1.0 CD B:ARG705 3.9 67.6 1.0 CG A:PRO657 4.0 65.2 1.0 CG1 B:VAL699 4.1 67.0 1.0 N B:TRP702 4.2 75.5 1.0 CB B:TRP702 4.2 57.2 1.0 C B:GLY701 4.5 70.6 1.0 CG B:ARG705 4.5 63.7 1.0 CD1 B:TRP702 4.6 57.7 1.0 CZ B:ARG705 4.6 75.1 1.0 CD A:PRO657 4.6 65.1 1.0 O B:GLY701 4.7 71.7 1.0 NE B:ARG705 4.7 76.8 1.0 O A:PRO657 4.7 69.2 1.0 CG B:TRP702 4.8 48.1 1.0 CB B:ARG705 4.9 61.0 1.0 CB A:PRO657 4.9 70.8 1.0

E.Mccloskey, M.Kashipathy, A.Cooper, P.Gao, D.K.Johnson, K.P.Battaile, S.Lovell, D.J.Davido. Hsv-1 ICP0 Dimer Domain Adopts A Novel Beta-Barrel Fold. Proteins 2024.
ISSN: ESSN 1097-0134
PubMed: 38372168
DOI: 10.1002/PROT.26673