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Iodine in PDB 8zjv: Crystal Structure of the ERK2 Complexed with 5-Iodotubercidin

Enzymatic activity of Crystal Structure of the ERK2 Complexed with 5-Iodotubercidin

All present enzymatic activity of Crystal Structure of the ERK2 Complexed with 5-Iodotubercidin:
2.7.11.24;

Protein crystallography data

The structure of Crystal Structure of the ERK2 Complexed with 5-Iodotubercidin, PDB code: 8zjv was solved by Y.Yang, L.Fu, R.Chen, H.Cheng, X.Sun, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.52 / 1.80
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 96.979, 96.979, 95.53, 90, 90, 120
R / Rfree (%) 19 / 22

Other elements in 8zjv:

The structure of Crystal Structure of the ERK2 Complexed with 5-Iodotubercidin also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Iodine Binding Sites:

The binding sites of Iodine atom in the Crystal Structure of the ERK2 Complexed with 5-Iodotubercidin (pdb code 8zjv). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the Crystal Structure of the ERK2 Complexed with 5-Iodotubercidin, PDB code: 8zjv:

Iodine binding site 1 out of 1 in 8zjv

Go back to Iodine Binding Sites List in 8zjv
Iodine binding site 1 out of 1 in the Crystal Structure of the ERK2 Complexed with 5-Iodotubercidin


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Crystal Structure of the ERK2 Complexed with 5-Iodotubercidin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:I401

b:49.7
occ:1.00
IAE A:5ID401 0.0 49.7 1.0
C7 A:5ID401 2.1 32.2 1.0
C8 A:5ID401 3.0 24.8 1.0
OE1 A:GLN105 3.2 55.1 1.0
C5 A:5ID401 3.2 28.9 1.0
NE2 A:GLN105 3.5 47.3 1.0
CD A:GLN105 3.5 44.5 1.0
N6 A:5ID401 3.6 28.4 1.0
C6 A:5ID401 3.8 28.6 1.0
O A:HOH551 4.2 38.1 1.0
N9 A:5ID401 4.2 27.8 1.0
C4 A:5ID401 4.3 26.3 1.0
OD1 A:ASP167 4.4 33.6 1.0
CB A:CYS166 4.5 21.4 1.0
CD1 A:LEU156 4.6 26.1 1.0
CG A:GLN105 4.6 35.8 1.0
CG1 A:ILE84 4.6 25.4 1.0
CB A:GLN105 4.7 34.0 1.0
CE A:LYS54 4.7 48.5 1.0
NZ A:LYS54 4.8 44.6 1.0
SG A:CYS166 4.8 23.9 1.0
CG1 A:VAL39 4.9 35.4 1.0
CG2 A:VAL39 4.9 33.2 1.0

Reference:

Y.Yang, L.Fu, R.Chen, H.Cheng, X.Sun. Crystal Structure of the ERK2 Complexed with 5-Iodotubercidin To Be Published.
Page generated: Sat Aug 9 00:38:59 2025

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