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Iodine in PDB 9e50: Tad From Carmabin Biosynthetic Pathway in Complex with Nad - Crystal Form 2

Protein crystallography data

The structure of Tad From Carmabin Biosynthetic Pathway in Complex with Nad - Crystal Form 2, PDB code: 9e50 was solved by M.R.Rankin, J.L.Smith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.16 / 1.68
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 55.433, 72.813, 209.207, 90, 90, 90
R / Rfree (%) 20.1 / 23

Iodine Binding Sites:

The binding sites of Iodine atom in the Tad From Carmabin Biosynthetic Pathway in Complex with Nad - Crystal Form 2 (pdb code 9e50). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 2 binding sites of Iodine where determined in the Tad From Carmabin Biosynthetic Pathway in Complex with Nad - Crystal Form 2, PDB code: 9e50:
Jump to Iodine binding site number: 1; 2;

Iodine binding site 1 out of 2 in 9e50

Go back to Iodine Binding Sites List in 9e50
Iodine binding site 1 out of 2 in the Tad From Carmabin Biosynthetic Pathway in Complex with Nad - Crystal Form 2


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Tad From Carmabin Biosynthetic Pathway in Complex with Nad - Crystal Form 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:I2402

b:28.9
occ:0.68
O A:HOH2939 3.4 28.1 1.0
N A:MET2236 3.7 18.7 1.0
CE A:LYS1967 4.0 35.2 1.0
CB A:MET2236 4.0 20.7 1.0
O A:HOH2753 4.1 40.3 1.0
CG1 A:ILE2235 4.1 21.4 1.0
CG A:MET2236 4.2 27.7 1.0
CB A:ALA2239 4.3 20.8 1.0
CA A:MET2236 4.5 19.9 1.0
CA A:ILE2235 4.5 18.6 1.0
C A:ILE2235 4.6 16.7 1.0
CD1 A:ILE1976 4.7 19.7 1.0
CG A:LYS1967 4.7 25.9 1.0
CB A:ILE2235 4.9 18.4 1.0
CD A:LYS1967 4.9 36.8 1.0

Iodine binding site 2 out of 2 in 9e50

Go back to Iodine Binding Sites List in 9e50
Iodine binding site 2 out of 2 in the Tad From Carmabin Biosynthetic Pathway in Complex with Nad - Crystal Form 2


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Tad From Carmabin Biosynthetic Pathway in Complex with Nad - Crystal Form 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:I2402

b:37.1
occ:0.56
NZ B:LYS1967 3.2 57.5 1.0
O B:HOH2680 3.5 29.2 1.0
N B:MET2236 3.7 29.6 1.0
CB B:MET2236 4.1 34.2 1.0
CG1 B:ILE2235 4.1 29.5 1.0
CB B:ALA2239 4.3 27.9 1.0
CG B:MET2236 4.4 45.6 1.0
CE B:LYS1967 4.5 47.8 1.0
CA B:ILE2235 4.5 30.5 1.0
CA B:MET2236 4.5 29.3 1.0
C B:ILE2235 4.6 29.8 1.0
CD1 B:ILE1976 4.7 27.9 1.0
CB B:ILE2235 4.9 28.4 1.0
CD B:LYS1967 4.9 51.5 1.0
CD1 B:ILE2235 4.9 30.7 1.0

Reference:

M.R.Rankin, J.L.Smith. Tad From Carmabin Biosynthetic Pathway in Complex with Nad - Crystal Form 2 To Be Published.
Page generated: Sat Aug 9 00:42:14 2025

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