Iodine in PDB 9iur: Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803

The structure of Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803, PDB code: 9iur was solved by J.Li, J.X.Deng, Y.L.Jiang, C.Z.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	13.04 / 2.35
Space group	P 41
Cell size a, b, c (Å), α, β, γ (°)	132.963, 132.963, 38.085, 90, 90, 90
R / Rfree (%)	23.3 / 27.2

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20;

Binding sites:

The binding sites of Iodine atom in the Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803 (pdb code 9iur). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 20 binding sites of Iodine where determined in the Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803, PDB code: 9iur:
Jump to Iodine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iodine binding site 1 out of 20 in the Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803 within 5.0Å range: probe atom residue distance (Å) B Occ A:I201 b:81.9 occ:1.00 O A:HOH343 3.3 47.9 1.0

Iodine binding site 2 out of 20 in the Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803 within 5.0Å range:

Iodine binding site 3 out of 20 in the Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 3 of Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803 within 5.0Å range: probe atom residue distance (Å) B Occ A:I203 b:89.5 occ:1.00 CD A:PRO101 4.2 41.6 1.0 CG A:PRO101 4.3 43.8 1.0 CB A:LEU53 4.3 25.5 1.0 CD1 A:LEU53 4.3 32.1 1.0 CD1 A:LEU141 4.3 32.5 1.0 CB A:TRP16 4.4 37.6 1.0 O A:LEU53 4.6 32.1 1.0 CB A:LEU141 4.8 46.1 1.0 CG A:LEU53 4.9 31.1 1.0 CG A:LEU141 5.0 42.8 1.0

Iodine binding site 4 out of 20 in the Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 4 of Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803 within 5.0Å range:

Iodine binding site 5 out of 20 in the Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 5 of Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803 within 5.0Å range: probe atom residue distance (Å) B Occ A:I205 b:96.0 occ:1.00 I A:IOD206 4.1 98.2 1.0

Iodine binding site 6 out of 20 in the Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 6 of Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803 within 5.0Å range: probe atom residue distance (Å) B Occ A:I206 b:98.2 occ:1.00 O A:HOH341 3.2 33.0 1.0 CB A:PRO15 3.6 53.6 1.0 CG A:PRO15 3.9 42.3 1.0 I A:IOD205 4.1 96.0 1.0 O A:HOH339 4.9 43.0 1.0 CA A:PRO15 4.9 40.0 1.0

Iodine binding site 7 out of 20 in the Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 7 of Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803 within 5.0Å range: probe atom residue distance (Å) B Occ B:I201 b:79.0 occ:1.00 CA B:GLN138 3.9 34.5 1.0 CB B:LEU141 3.9 40.6 1.0 N B:ALA57 4.0 34.2 1.0 CG B:GLN138 4.1 37.9 1.0 O B:HOH344 4.1 44.7 1.0 O B:GLN138 4.1 40.3 1.0 CB B:ALA57 4.2 36.4 1.0 N B:ALA142 4.3 39.9 1.0 CB B:GLN138 4.3 33.8 1.0 CD1 B:LEU141 4.5 37.8 1.0 C B:GLN138 4.5 35.1 1.0 C B:ALA142 4.6 48.5 1.0 CA B:ALA57 4.7 31.1 1.0 C B:LEU141 4.7 41.0 1.0 CA B:ALA142 4.7 45.3 1.0 CA B:GLN56 4.8 41.7 1.0 O B:LEU137 4.8 32.6 1.0 O B:LEU53 4.8 36.1 1.0 CG B:LEU141 4.8 37.2 1.0 N B:GLN138 4.8 33.8 1.0 C B:GLN56 4.9 39.1 1.0 CA B:LEU141 4.9 40.1 1.0 I B:IOD202 5.0 129.2 1.0 O B:PRO55 5.0 43.1 1.0

Iodine binding site 8 out of 20 in the Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 8 of Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803 within 5.0Å range: probe atom residue distance (Å) B Occ B:I202 b:129.2 occ:1.00 O B:HOH344 3.2 44.7 1.0 CG B:PRO101 4.0 28.6 1.0 CD B:PRO101 4.3 31.2 1.0 CB B:TRP16 4.3 30.2 1.0 CD1 B:LEU141 4.6 37.8 1.0 CB B:LEU53 4.6 32.9 1.0 CB B:PRO101 4.7 30.9 1.0 CD1 B:LEU53 4.7 24.4 1.0 O B:LEU53 4.7 36.1 1.0 CB B:LEU141 4.8 40.6 1.0 CG B:TRP16 4.8 28.2 1.0 NE2 B:HIS54 4.9 49.4 1.0 I B:IOD201 5.0 79.0 1.0

Iodine binding site 9 out of 20 in the Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 9 of Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803 within 5.0Å range: probe atom residue distance (Å) B Occ B:I203 b:135.2 occ:1.00 OE1 B:GLN22 3.0 61.5 1.0 O B:HOH342 4.1 35.5 1.0 CD B:GLN22 4.2 58.0 1.0 CD B:LYS25 4.3 48.6 1.0 CE1 B:TYR18 4.4 43.1 1.0 O A:HOH323 4.4 40.2 1.0 CB B:ASP21 4.5 29.0 1.0 CB A:ALA66 4.6 38.1 1.0 O B:ASP21 4.8 29.8 1.0 C B:ASP21 4.8 31.0 1.0 N B:GLN22 4.9 30.0 1.0 NZ B:LYS25 5.0 50.7 1.0 CD1 B:TYR18 5.0 41.1 1.0

Iodine binding site 10 out of 20 in the Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 10 of Crystal Structure of Ccms From Synechocystis Sp. Pcc 6803 within 5.0Å range: probe atom residue distance (Å) B Occ B:I204 b:144.3 occ:1.00 N B:TRP16 3.5 30.1 1.0 O B:HOH324 3.5 32.6 1.0 CB B:PRO15 3.7 40.2 1.0 C B:PRO15 4.1 31.9 1.0 NH1 B:ARG19 4.1 44.1 1.0 CA B:PRO15 4.1 35.2 1.0 CB B:TRP16 4.2 30.2 1.0 CA B:TRP16 4.2 29.5 1.0 CD1 B:TRP16 4.2 21.9 1.0 CG B:TRP16 4.6 28.2 1.0 CG B:PRO15 5.0 31.3 1.0

J.Li, J.X.Deng, X.Chen, B.Li, B.R.Li, Z.L.Zhu, J.X.Liu, C.Z.Zhou, Y.L.Jiang, Y.X.Chen, H.L.Mi. Assembly Mechanism of Beta-Carboxysome Shell Mediated By the Chaperone Ccms To Be Published.