Atomistry » Iodine » PDB 9axj-9rp9 » 9rp9
Atomistry »
  Iodine »
    PDB 9axj-9rp9 »
      9rp9 »

Iodine in PDB 9rp9: Crystal Structure of Mouse Pvhl-Elonginb-Elonginc Complex

Protein crystallography data

The structure of Crystal Structure of Mouse Pvhl-Elonginb-Elonginc Complex, PDB code: 9rp9 was solved by A.Blat, E.Biterova, C.Cukier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.04 / 2.10
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 73.48, 59.78, 91.67, 90, 100.85, 90
R / Rfree (%) 18.2 / 22.2

Iodine Binding Sites:

The binding sites of Iodine atom in the Crystal Structure of Mouse Pvhl-Elonginb-Elonginc Complex (pdb code 9rp9). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total 3 binding sites of Iodine where determined in the Crystal Structure of Mouse Pvhl-Elonginb-Elonginc Complex, PDB code: 9rp9:
Jump to Iodine binding site number: 1; 2; 3;

Iodine binding site 1 out of 3 in 9rp9

Go back to Iodine Binding Sites List in 9rp9
Iodine binding site 1 out of 3 in the Crystal Structure of Mouse Pvhl-Elonginb-Elonginc Complex


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Crystal Structure of Mouse Pvhl-Elonginb-Elonginc Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:I202

b:54.4
occ:1.00
CB A:SER105 3.6 32.2 1.0
N A:LEU106 3.7 29.8 1.0
CA A:SER105 3.8 31.9 1.0
CD A:ARG79 3.9 33.8 1.0
CG A:LEU106 4.1 33.2 1.0
C A:SER105 4.2 30.8 1.0
CG A:ARG79 4.3 30.8 1.0
CD1 A:LEU106 4.4 34.4 1.0
CB A:LEU106 4.6 33.3 1.0
CA A:LEU106 4.8 32.0 1.0
OG A:SER105 4.8 40.8 1.0

Iodine binding site 2 out of 3 in 9rp9

Go back to Iodine Binding Sites List in 9rp9
Iodine binding site 2 out of 3 in the Crystal Structure of Mouse Pvhl-Elonginb-Elonginc Complex


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 2 of Crystal Structure of Mouse Pvhl-Elonginb-Elonginc Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:I201

b:62.8
occ:1.00
OG1 B:THR23 3.6 37.0 1.0
CB B:PHE25 3.9 31.2 1.0
CD2 B:PHE25 4.0 39.2 1.0
CG B:PHE25 4.2 36.4 1.0
CG2 B:THR23 4.4 39.2 1.0
CB B:THR23 4.5 40.2 1.0
O B:ASP53 4.7 43.8 1.0
CE2 B:PHE25 4.9 36.2 1.0

Iodine binding site 3 out of 3 in 9rp9

Go back to Iodine Binding Sites List in 9rp9
Iodine binding site 3 out of 3 in the Crystal Structure of Mouse Pvhl-Elonginb-Elonginc Complex


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 3 of Crystal Structure of Mouse Pvhl-Elonginb-Elonginc Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:I201

b:48.0
occ:1.00
ND2 C:ASN108 3.5 35.9 1.0
CE C:MET105 3.9 57.3 1.0
CB C:PHE109 4.0 28.0 1.0
CA C:PHE109 4.2 29.5 1.0
N C:PHE109 4.3 28.2 1.0
CD1 C:PHE109 4.4 30.3 1.0
O C:MET105 4.5 25.2 1.0
CG C:ASN108 4.6 36.7 1.0
CG C:PHE109 4.7 28.8 1.0
CG1 A:VAL147 4.8 37.3 1.0
CG2 A:VAL147 4.8 40.8 1.0
C C:ASN108 4.9 28.3 1.0
CB C:ASN108 4.9 33.4 1.0

Reference:

A.Blat, E.Biterova, C.Cukier. Crystal Structure of Mouse Pvhl-Elonginb-Elonginc Complex To Be Published.
Page generated: Sat Aug 9 00:55:17 2025

Last articles

K in 8QOS
K in 8QN2
K in 8QNF
K in 8QA7
K in 8QH9
K in 8QB1
K in 8QH4
K in 8Q4A
K in 8Q49
K in 8Q48
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy