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Iodine in PDB 1s6v: Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link

Enzymatic activity of Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link

All present enzymatic activity of Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link:
1.11.1.5;

Protein crystallography data

The structure of Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link, PDB code: 1s6v was solved by M.Guo, B.Bhaskar, H.Li, T.P.Barrows, T.L.Poulos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.65 / 1.88
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 45.240, 107.920, 88.380, 90.00, 104.42, 90.00
R / Rfree (%) 19 / 24.3

Other elements in 1s6v:

The structure of Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link also contains other interesting chemical elements:

Iron (Fe) 4 atoms

Iodine Binding Sites:

The binding sites of Iodine atom in the Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link (pdb code 1s6v). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link, PDB code: 1s6v:

Iodine binding site 1 out of 1 in 1s6v

Go back to Iodine Binding Sites List in 1s6v
Iodine binding site 1 out of 1 in the Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Structure of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link within 5.0Å range:
probe atom residue distance (Å) B Occ
A:I800

b:43.6
occ:0.50
 O A:ALA8 3.5 38.7 1.0
CG1 A:VAL10 3.7 49.6 1.0
CB A:ALA280 4.0 49.9 1.0
N A:VAL10 4.1 44.5 1.0
C A:ALA8 4.1 38.5 1.0
CD A:PRO281 4.2 44.9 1.0
CD A:PRO277 4.3 42.7 1.0
CA A:ALA280 4.4 49.6 1.0
CA A:SER9 4.5 42.0 1.0
CG A:PRO277 4.5 45.2 1.0
N A:SER9 4.6 39.8 1.0
CB A:ALA8 4.6 33.3 1.0
CB A:VAL10 4.6 49.3 1.0
C A:SER9 4.7 43.0 1.0
CA A:VAL10 5.0 48.3 1.0

Reference:

M.Guo, B.Bhaskar, H.Li, T.P.Barrows, T.L.Poulos. Crystal Structure and Characterization of A Cytochrome C Peroxidase-Cytochrome C Site-Specific Cross-Link Proc.Natl.Acad.Sci.Usa V. 101 5940 2004.
ISSN: ISSN 0027-8424
PubMed: 15071191
DOI: 10.1073/PNAS.0306708101
Page generated: Sun Aug 11 12:47:15 2024

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