Iodine in PDB 7sdo: [Iu:Ag+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice

The structure of [Iu:Ag+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7sdo was solved by S.Vecchioni, B.Lu, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.37 / 3.62
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	105.823, 105.823, 91.006, 90, 90, 120
R / Rfree (%)	26.5 / 34.5

The structure of [Iu:Ag+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice also contains other interesting chemical elements:

Silver

(Ag)

2 atoms

The binding sites of Iodine atom in the [Iu:Ag+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice (pdb code 7sdo). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the [Iu:Ag+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7sdo:

Iodine binding site 1 out of 1 in the [Iu:Ag+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of [Iu:Ag+:C] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice within 5.0Å range: probe atom residue distance (Å) B Occ A:I12 b:306.8 occ:1.00 I5 A:5IU12 0.0 306.8 1.0 C5 A:5IU12 2.2 296.4 1.0 C4 A:5IU12 3.1 297.9 1.0 C6 A:5IU12 3.2 288.6 1.0 O4 A:5IU12 3.3 305.5 1.0 C6 A:DT11 3.3 302.9 1.0 C5 A:DT11 3.5 305.8 1.0 C7 A:DT11 3.6 314.1 1.0 C2' A:DT11 4.0 289.2 1.0 N1 A:DT11 4.1 294.7 1.0 O4 A:DT13 4.3 286.8 1.0 N3 A:5IU12 4.4 292.2 1.0 C4 A:DT11 4.4 300.5 1.0 N1 A:5IU12 4.4 283.1 1.0 C1' A:DT11 4.6 291.5 1.0 C2 A:DT11 4.9 289.6 1.0 C2 A:5IU12 4.9 285.4 1.0 N3 A:DT11 4.9 293.1 1.0

S.Vecchioni, B.Lu, R.Sha, Y.P.Ohayon, J.Yoder, K.Woloszyn, W.Bernfeld, W.Hendrickson, L.Rothschild, C.Mao, S.Wind, N.C.Seeman. Metal-Mediated Dna Nanotechnology in 3D: Reengineering the Semantomorphic Alphabet To Be Published.