Iodine in PDB 7se1: [Iu:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice

The structure of [Iu:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7se1 was solved by B.Lu, S.Vecchioni, N.C.Seeman, R.Sha, Y.P.Ohayon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.50 / 4.19
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	107.084, 107.084, 86.813, 90, 90, 120
R / Rfree (%)	18.4 / 29

The structure of [Iu:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice also contains other interesting chemical elements:

Mercury

(Hg)

1 atom

The binding sites of Iodine atom in the [Iu:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice (pdb code 7se1). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the [Iu:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice, PDB code: 7se1:

Iodine binding site 1 out of 1 in the [Iu:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice


Mono view


Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of [Iu:HG2+:Mc] Metal-Mediated Dna Base Pair in A Self-Assembling Rhombohedral Lattice within 5.0Å range: probe atom residue distance (Å) B Occ A:I12 b:399.6 occ:1.00 I5 A:5IU12 0.0 399.6 1.0 C5 A:5IU12 2.1 356.9 1.0 C4 A:5IU12 3.1 340.4 1.0 C6 A:5IU12 3.1 350.9 1.0 O4 A:5IU12 3.2 335.7 1.0 C2' A:DT11 3.6 337.4 1.0 N1 A:DT11 3.6 327.4 1.0 O4 A:DT13 3.7 321.5 1.0 C6 A:DT11 3.7 334.4 1.0 C2 A:DT11 3.8 304.7 1.0 C5 A:DT11 4.0 326.3 1.0 C7 A:DT13 4.0 369.6 1.0 N3 A:DT11 4.0 284.3 1.0 C4 A:DT11 4.1 298.6 1.0 C1' A:DT11 4.2 328.3 1.0 C4 A:DT13 4.2 309.8 1.0 N3 A:5IU12 4.3 315.1 1.0 N1 A:5IU12 4.3 332.2 1.0 OP1 A:5IU12 4.4 335.6 1.0 C5 A:DT13 4.4 322.7 1.0 O2 A:DT11 4.4 308.9 1.0 C2 A:5IU12 4.8 314.3 1.0 C7 A:DT11 4.8 339.9 1.0 O4 A:DT11 4.9 294.7 1.0 N6 B:DA3 4.9 293.6 1.0 HG B:HG101 4.9 274.2 0.8 OP2 A:5IU12 4.9 307.4 1.0

S.Vecchioni, B.Lu, R.Sha, Y.P.Ohayon, J.Yoder, K.Woloszyn, W.Bernfeld, W.Hendrickson, L.Rothschild, C.Mao, S.Wind, N.C.Seeman. Metal-Mediated Dna Nanotechnology in 3D: Reengineering the Semantomorphic Alphabet To Be Published.