Iodine in PDB 8bvx: Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH13264

Enzymatic activity of Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH13264

All present enzymatic activity of Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH13264:
4.2.99.18;

Protein crystallography data

The structure of Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH13264, PDB code: 8bvx was solved by E.Scaletti, P.Stenmark, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	58.85 / 2.35
*Space group*	P 2₁ 2₁ 2₁
*Cell size a, b, c (Å), α, β, γ (°)*	81.589, 81.874, 169.954, 90, 90, 90
*R / R_free (%)*	26.3 / 30.2

Other elements in 8bvx:

The structure of Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH13264 also contains other interesting chemical elements:

Nickel

(Ni)

1 atom

Iodine Binding Sites:

The binding sites of Iodine atom in the Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH13264 (pdb code 8bvx). This binding sites where shown within 5.0 Angstroms radius around Iodine atom.
In total only one binding site of Iodine was determined in the Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH13264, PDB code: 8bvx:

Iodine binding site 1 out of 1 in 8bvx

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Iodine Binding Sites List in 8bvx

Iodine binding site 1 out of 1 in the Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH13264

Mono view

Stereo pair view

A full contact list of Iodine with other atoms in the I binding site number 1 of Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH13264 within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:I401 b:136.3 occ:1.00	I01	A:RYF401	0.0	136.3	1.0
	C02	A:RYF401	2.1	106.9	1.0
	C17	A:RYF401	3.0	102.1	1.0
	C03	A:RYF401	3.1	100.8	1.0
	O	A:ASN150	3.2	53.3	1.0
	O	A:SER147	3.5	50.1	1.0
	C	A:ASN150	3.6	52.3	1.0
	CD1	A:ILE155	3.6	50.7	1.0
	CA	A:ASN151	3.9	53.4	1.0
	N	A:ASN151	4.0	53.4	1.0
	O2	A:EDO403	4.0	65.8	1.0
	C2	A:EDO403	4.2	64.7	1.0
	C16	A:RYF401	4.4	95.1	1.0
	C04	A:RYF401	4.4	94.2	1.0
	CA	A:ASN150	4.4	52.2	1.0
	C	A:ASN151	4.4	52.7	1.0
	N	A:ASN150	4.5	53.4	1.0
	CB	A:ASN150	4.5	52.0	1.0
	C	A:SER147	4.6	48.5	1.0
	N	A:ILE152	4.7	52.6	1.0
	CB	A:SER147	4.7	46.3	1.0
	CG1	A:ILE155	4.9	50.1	1.0
	CA	A:SER147	4.9	46.7	1.0
	C05	A:RYF401	4.9	88.7	1.0

Reference:

E.Scaletti, P.Stenmark. Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH13264 To Be Published.

Page generated: Mon Aug 12 02:30:39 2024

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